Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC3O95833 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC3O95833 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLIC3O95833 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.83■□□□□ 0.93
CLIC3O95833 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.83■□□□□ 0.92
CLIC3O95833 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.83■□□□□ 0.92
CLIC3O95833 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLIC3O95833 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC3O95833 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC3O95833 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC3O95833 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC3O95833 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.82■□□□□ 0.92
CLIC3O95833 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC3O95833 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC3O95833 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CLIC3O95833 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.82■□□□□ 0.92
CLIC3O95833 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC3O95833 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLIC3O95833 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CLIC3O95833 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.82■□□□□ 0.92
CLIC3O95833 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
CLIC3O95833 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.81■□□□□ 0.92
CLIC3O95833 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC3O95833 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC3O95833 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CLIC3O95833 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CLIC3O95833 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CLIC3O95833 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC3O95833 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC3O95833 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CLIC3O95833 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.81■□□□□ 0.92
CLIC3O95833 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC3O95833 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC3O95833 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC3O95833 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC3O95833 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.8■□□□□ 0.92
CLIC3O95833 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CLIC3O95833 SMPD5-203ENST00000639008 1464 ntBASIC20.8■□□□□ 0.92
CLIC3O95833 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC3O95833 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC3O95833 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CLIC3O95833 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.8■□□□□ 0.92
CLIC3O95833 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CLIC3O95833 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLIC3O95833 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CLIC3O95833 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CLIC3O95833 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.79■□□□□ 0.92
CLIC3O95833 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 FBXW4P1-201ENST00000426721 2239 ntBASIC20.79■□□□□ 0.92
CLIC3O95833 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.79■□□□□ 0.92
CLIC3O95833 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.79■□□□□ 0.92
CLIC3O95833 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CLIC3O95833 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.78■□□□□ 0.92
CLIC3O95833 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CLIC3O95833 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC3O95833 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CLIC3O95833 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.78■□□□□ 0.92
CLIC3O95833 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.78■□□□□ 0.92
CLIC3O95833 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.78■□□□□ 0.92
CLIC3O95833 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CLIC3O95833 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CLIC3O95833 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.77■□□□□ 0.92
CLIC3O95833 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC3O95833 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC3O95833 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.77■□□□□ 0.92
CLIC3O95833 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CLIC3O95833 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CLIC3O95833 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
CLIC3O95833 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CLIC3O95833 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC3O95833 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.77■□□□□ 0.92
CLIC3O95833 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.77■□□□□ 0.92
CLIC3O95833 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CLIC3O95833 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.77■□□□□ 0.92
CLIC3O95833 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.77■□□□□ 0.92
CLIC3O95833 AL161729.1-201ENST00000604104 1402 ntBASIC20.77■□□□□ 0.91
CLIC3O95833 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CLIC3O95833 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.76■□□□□ 0.91
CLIC3O95833 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.76■□□□□ 0.91
CLIC3O95833 C11orf96-202ENST00000528572 1834 ntBASIC20.76■□□□□ 0.91
CLIC3O95833 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CLIC3O95833 AC139530.1-201ENST00000575312 1977 ntBASIC20.76■□□□□ 0.91
CLIC3O95833 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.76■□□□□ 0.91
CLIC3O95833 ESRRAP2-201ENST00000418437 1549 ntBASIC20.76■□□□□ 0.91
CLIC3O95833 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms