Protein–RNA interactions for Protein: O95361

TRIM16, Tripartite motif-containing protein 16, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM16O95361 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM16O95361 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM16O95361 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
TRIM16O95361 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC22.77■■□□□ 1.24
TRIM16O95361 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.77■■□□□ 1.24
TRIM16O95361 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
TRIM16O95361 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM16O95361 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM16O95361 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM16O95361 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.76■■□□□ 1.23
TRIM16O95361 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM16O95361 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.76■■□□□ 1.23
TRIM16O95361 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM16O95361 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
TRIM16O95361 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.76■■□□□ 1.23
TRIM16O95361 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM16O95361 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
TRIM16O95361 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
TRIM16O95361 AF131216.4-201ENST00000638924 1588 ntBASIC22.76■■□□□ 1.23
TRIM16O95361 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM16O95361 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM16O95361 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM16O95361 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
TRIM16O95361 MIR6722-201ENST00000617286 78 ntBASIC22.75■■□□□ 1.23
TRIM16O95361 AL136967.2-201ENST00000623968 743 ntBASIC22.75■■□□□ 1.23
TRIM16O95361 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM16O95361 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM16O95361 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM16O95361 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.75■■□□□ 1.23
TRIM16O95361 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM16O95361 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
TRIM16O95361 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.74■■□□□ 1.23
TRIM16O95361 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.74■■□□□ 1.23
TRIM16O95361 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC22.74■■□□□ 1.23
TRIM16O95361 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
TRIM16O95361 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM16O95361 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.74■■□□□ 1.23
TRIM16O95361 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM16O95361 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
TRIM16O95361 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM16O95361 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.73■■□□□ 1.23
TRIM16O95361 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
TRIM16O95361 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.73■■□□□ 1.23
TRIM16O95361 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
TRIM16O95361 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.72■■□□□ 1.23
TRIM16O95361 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
TRIM16O95361 AL022069.1-201ENST00000568025 1636 ntBASIC22.72■■□□□ 1.23
TRIM16O95361 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.72■■□□□ 1.23
TRIM16O95361 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.72■■□□□ 1.23
TRIM16O95361 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM16O95361 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.72■■□□□ 1.23
TRIM16O95361 DUX4L19-201ENST00000557448 1267 ntBASIC22.72■■□□□ 1.23
TRIM16O95361 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.72■■□□□ 1.23
TRIM16O95361 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
TRIM16O95361 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TRIM16O95361 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
TRIM16O95361 ABCB10P4-201ENST00000566803 2184 ntBASIC22.72■■□□□ 1.23
TRIM16O95361 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.72■■□□□ 1.23
TRIM16O95361 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
TRIM16O95361 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM16O95361 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TRIM16O95361 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.71■■□□□ 1.23
TRIM16O95361 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM16O95361 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM16O95361 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.71■■□□□ 1.23
TRIM16O95361 AL162430.1-201ENST00000480705 870 ntBASIC22.71■■□□□ 1.23
TRIM16O95361 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM16O95361 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.71■■□□□ 1.23
TRIM16O95361 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.71■■□□□ 1.23
TRIM16O95361 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TRIM16O95361 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.71■■□□□ 1.23
TRIM16O95361 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.23
TRIM16O95361 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM16O95361 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM16O95361 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM16O95361 AC004448.1-201ENST00000458332 883 ntBASIC22.7■■□□□ 1.22
TRIM16O95361 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.7■■□□□ 1.22
TRIM16O95361 AF213884.3-201ENST00000563833 479 ntBASIC22.7■■□□□ 1.22
TRIM16O95361 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
TRIM16O95361 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.7■■□□□ 1.22
TRIM16O95361 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM16O95361 AC131274.2-201ENST00000580697 1507 ntBASIC22.7■■□□□ 1.22
TRIM16O95361 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TRIM16O95361 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TRIM16O95361 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.69■■□□□ 1.22
TRIM16O95361 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.69■■□□□ 1.22
TRIM16O95361 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM16O95361 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM16O95361 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM16O95361 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM16O95361 MIR939-201ENST00000401314 82 ntBASIC22.69■■□□□ 1.22
TRIM16O95361 AC091305.1-201ENST00000479476 895 ntBASIC22.69■■□□□ 1.22
TRIM16O95361 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM16O95361 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TRIM16O95361 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM16O95361 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM16O95361 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
TRIM16O95361 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
TRIM16O95361 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.68■■□□□ 1.22
TRIM16O95361 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms