Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.06■□□□□ 0.96
SNX4O95219 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SNX4O95219 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX4O95219 AL161729.1-201ENST00000604104 1402 ntBASIC21.05■□□□□ 0.96
SNX4O95219 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SNX4O95219 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX4O95219 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX4O95219 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
SNX4O95219 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SNX4O95219 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX4O95219 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SNX4O95219 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.05■□□□□ 0.96
SNX4O95219 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX4O95219 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX4O95219 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SNX4O95219 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.04■□□□□ 0.96
SNX4O95219 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX4O95219 HLA-L-211ENST00000482052 1765 ntBASIC21.04■□□□□ 0.96
SNX4O95219 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX4O95219 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX4O95219 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SNX4O95219 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX4O95219 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX4O95219 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.03■□□□□ 0.96
SNX4O95219 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
SNX4O95219 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX4O95219 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SNX4O95219 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SNX4O95219 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.03■□□□□ 0.96
SNX4O95219 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.03■□□□□ 0.96
SNX4O95219 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
SNX4O95219 AC131274.2-201ENST00000580697 1507 ntBASIC21.03■□□□□ 0.96
SNX4O95219 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNX4O95219 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNX4O95219 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNX4O95219 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNX4O95219 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.02■□□□□ 0.96
SNX4O95219 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.02■□□□□ 0.96
SNX4O95219 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNX4O95219 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.02■□□□□ 0.95
SNX4O95219 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNX4O95219 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.01■□□□□ 0.95
SNX4O95219 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNX4O95219 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX4O95219 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX4O95219 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNX4O95219 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.01■□□□□ 0.95
SNX4O95219 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX4O95219 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
SNX4O95219 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNX4O95219 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SNX4O95219 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX4O95219 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX4O95219 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNX4O95219 CD72-202ENST00000378430 585 ntTSL 3 BASIC21■□□□□ 0.95
SNX4O95219 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21■□□□□ 0.95
SNX4O95219 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNX4O95219 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21■□□□□ 0.95
SNX4O95219 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21■□□□□ 0.95
SNX4O95219 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
SNX4O95219 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.99■□□□□ 0.95
SNX4O95219 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX4O95219 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.99■□□□□ 0.95
SNX4O95219 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.99■□□□□ 0.95
SNX4O95219 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.99■□□□□ 0.95
SNX4O95219 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
SNX4O95219 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNX4O95219 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SNX4O95219 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX4O95219 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX4O95219 AL117328.2-201ENST00000624617 1940 ntBASIC20.98■□□□□ 0.95
SNX4O95219 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
SNX4O95219 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX4O95219 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC20.98■□□□□ 0.95
SNX4O95219 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.98■□□□□ 0.95
SNX4O95219 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.98■□□□□ 0.95
SNX4O95219 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.98■□□□□ 0.95
SNX4O95219 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.98■□□□□ 0.95
SNX4O95219 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
SNX4O95219 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SNX4O95219 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.98■□□□□ 0.95
SNX4O95219 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.98■□□□□ 0.95
SNX4O95219 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX4O95219 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SNX4O95219 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNX4O95219 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SNX4O95219 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX4O95219 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
SNX4O95219 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
SNX4O95219 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.97■□□□□ 0.95
SNX4O95219 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX4O95219 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms