Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.29■■□□□ 1.8
CDKL5O76039 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDKL5O76039 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDKL5O76039 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.28■■□□□ 1.8
CDKL5O76039 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDKL5O76039 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDKL5O76039 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDKL5O76039 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CDKL5O76039 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CDKL5O76039 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDKL5O76039 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDKL5O76039 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CDKL5O76039 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.27■■□□□ 1.8
CDKL5O76039 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.27■■□□□ 1.8
CDKL5O76039 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDKL5O76039 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC26.27■■□□□ 1.8
CDKL5O76039 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
CDKL5O76039 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDKL5O76039 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CDKL5O76039 H19-210ENST00000439725 1929 ntTSL 2 BASIC26.27■■□□□ 1.8
CDKL5O76039 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC26.26■■□□□ 1.79
CDKL5O76039 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDKL5O76039 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CDKL5O76039 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC26.26■■□□□ 1.79
CDKL5O76039 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC26.26■■□□□ 1.79
CDKL5O76039 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.26■■□□□ 1.79
CDKL5O76039 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDKL5O76039 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
CDKL5O76039 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
CDKL5O76039 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CDKL5O76039 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDKL5O76039 AL035685.1-201ENST00000636663 812 ntBASIC26.25■■□□□ 1.79
CDKL5O76039 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC26.25■■□□□ 1.79
CDKL5O76039 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
CDKL5O76039 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC26.25■■□□□ 1.79
CDKL5O76039 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.25■■□□□ 1.79
CDKL5O76039 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
CDKL5O76039 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
CDKL5O76039 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDKL5O76039 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDKL5O76039 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDKL5O76039 TSPY9P-201ENST00000440215 945 ntBASIC26.24■■□□□ 1.79
CDKL5O76039 TSPY11P-201ENST00000442607 1045 ntBASIC26.24■■□□□ 1.79
CDKL5O76039 AC010997.5-201ENST00000609182 354 ntBASIC26.24■■□□□ 1.79
CDKL5O76039 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
CDKL5O76039 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
CDKL5O76039 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDKL5O76039 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDKL5O76039 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDKL5O76039 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDKL5O76039 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
CDKL5O76039 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDKL5O76039 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CDKL5O76039 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDKL5O76039 EXOG-217ENST00000630638 197 ntTSL 5 BASIC26.23■■□□□ 1.79
CDKL5O76039 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC26.23■■□□□ 1.79
CDKL5O76039 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CDKL5O76039 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
CDKL5O76039 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC26.22■■□□□ 1.79
CDKL5O76039 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDKL5O76039 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDKL5O76039 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
CDKL5O76039 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDKL5O76039 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDKL5O76039 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDKL5O76039 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC26.22■■□□□ 1.79
CDKL5O76039 DUSP8P3-201ENST00000399571 1760 ntBASIC26.22■■□□□ 1.79
CDKL5O76039 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.22■■□□□ 1.79
CDKL5O76039 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
CDKL5O76039 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDKL5O76039 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDKL5O76039 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC26.21■■□□□ 1.79
CDKL5O76039 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
CDKL5O76039 CD72-202ENST00000378430 585 ntTSL 3 BASIC26.21■■□□□ 1.79
CDKL5O76039 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
CDKL5O76039 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC26.2■■□□□ 1.79
CDKL5O76039 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDKL5O76039 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDKL5O76039 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
CDKL5O76039 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDKL5O76039 HES6-204ENST00000409182 863 ntTSL 2 BASIC26.2■■□□□ 1.78
CDKL5O76039 OR2A1-AS1-204ENST00000470435 602 ntBASIC26.2■■□□□ 1.78
CDKL5O76039 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC26.2■■□□□ 1.78
CDKL5O76039 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
CDKL5O76039 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDKL5O76039 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
CDKL5O76039 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDKL5O76039 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.19■■□□□ 1.78
CDKL5O76039 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDKL5O76039 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDKL5O76039 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
CDKL5O76039 CREM-229ENST00000474362 1030 ntTSL 2 BASIC26.19■■□□□ 1.78
CDKL5O76039 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.19■■□□□ 1.78
CDKL5O76039 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.19■■□□□ 1.78
CDKL5O76039 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDKL5O76039 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
CDKL5O76039 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.19■■□□□ 1.78
CDKL5O76039 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC26.19■■□□□ 1.78
CDKL5O76039 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
CDKL5O76039 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms