Protein–RNA interactions for Protein: O60930

RNASEH1, Ribonuclease H1, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH1O60930 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNASEH1O60930 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.08■■□□□ 1.29
RNASEH1O60930 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
RNASEH1O60930 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
RNASEH1O60930 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC23.08■■□□□ 1.29
RNASEH1O60930 DUX4L19-201ENST00000557448 1267 ntBASIC23.08■■□□□ 1.29
RNASEH1O60930 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.08■■□□□ 1.29
RNASEH1O60930 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.08■■□□□ 1.29
RNASEH1O60930 AC068473.5-201ENST00000616428 2072 ntBASIC23.08■■□□□ 1.29
RNASEH1O60930 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.28
RNASEH1O60930 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
RNASEH1O60930 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.08■■□□□ 1.28
RNASEH1O60930 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RNASEH1O60930 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
RNASEH1O60930 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.07■■□□□ 1.28
RNASEH1O60930 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.07■■□□□ 1.28
RNASEH1O60930 AL136162.1-201ENST00000607711 1078 ntBASIC23.07■■□□□ 1.28
RNASEH1O60930 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC23.07■■□□□ 1.28
RNASEH1O60930 LINC00543-201ENST00000567234 1845 ntBASIC23.07■■□□□ 1.28
RNASEH1O60930 AC142381.3-201ENST00000568208 1670 ntBASIC23.06■■□□□ 1.28
RNASEH1O60930 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RNASEH1O60930 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
RNASEH1O60930 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNASEH1O60930 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
RNASEH1O60930 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.06■■□□□ 1.28
RNASEH1O60930 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
RNASEH1O60930 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RNASEH1O60930 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
RNASEH1O60930 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNASEH1O60930 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.05■■□□□ 1.28
RNASEH1O60930 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.05■■□□□ 1.28
RNASEH1O60930 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.05■■□□□ 1.28
RNASEH1O60930 HLA-L-211ENST00000482052 1765 ntBASIC23.05■■□□□ 1.28
RNASEH1O60930 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.05■■□□□ 1.28
RNASEH1O60930 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.05■■□□□ 1.28
RNASEH1O60930 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNASEH1O60930 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNASEH1O60930 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RNASEH1O60930 CLDN5-201ENST00000403084 2357 ntBASIC23.05■■□□□ 1.28
RNASEH1O60930 AC135279.3-201ENST00000610945 1311 ntBASIC23.05■■□□□ 1.28
RNASEH1O60930 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RNASEH1O60930 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNASEH1O60930 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNASEH1O60930 AC079834.2-201ENST00000609776 1949 ntBASIC23.04■■□□□ 1.28
RNASEH1O60930 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNASEH1O60930 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNASEH1O60930 MIR935-201ENST00000401179 91 ntBASIC23.04■■□□□ 1.28
RNASEH1O60930 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RNASEH1O60930 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNASEH1O60930 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
RNASEH1O60930 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RNASEH1O60930 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RNASEH1O60930 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNASEH1O60930 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.03■■□□□ 1.28
RNASEH1O60930 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNASEH1O60930 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNASEH1O60930 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RNASEH1O60930 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
RNASEH1O60930 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RNASEH1O60930 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.03■■□□□ 1.28
RNASEH1O60930 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC23.03■■□□□ 1.28
RNASEH1O60930 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNASEH1O60930 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.02■■□□□ 1.28
RNASEH1O60930 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNASEH1O60930 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNASEH1O60930 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC23.02■■□□□ 1.28
RNASEH1O60930 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RNASEH1O60930 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
RNASEH1O60930 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RNASEH1O60930 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 SYT6-210ENST00000641643 1587 ntBASIC23.01■■□□□ 1.27
RNASEH1O60930 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNASEH1O60930 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23■■□□□ 1.27
RNASEH1O60930 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23■■□□□ 1.27
RNASEH1O60930 AP003733.4-201ENST00000623785 1697 ntBASIC23■■□□□ 1.27
RNASEH1O60930 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RNASEH1O60930 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNASEH1O60930 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23■■□□□ 1.27
RNASEH1O60930 AC142381.2-201ENST00000566120 298 ntBASIC23■■□□□ 1.27
RNASEH1O60930 SF1-220ENST00000626028 704 ntTSL 2 BASIC23■■□□□ 1.27
RNASEH1O60930 AC022211.4-201ENST00000625094 2161 ntBASIC23■■□□□ 1.27
RNASEH1O60930 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RNASEH1O60930 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.99■■□□□ 1.27
RNASEH1O60930 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RNASEH1O60930 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNASEH1O60930 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNASEH1O60930 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNASEH1O60930 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNASEH1O60930 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNASEH1O60930 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.99■■□□□ 1.27
RNASEH1O60930 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
RNASEH1O60930 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC22.99■■□□□ 1.27
RNASEH1O60930 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms