Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
OPHN1O60890 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.45■■□□□ 1.34
OPHN1O60890 AC096631.2-201ENST00000436136 790 ntBASIC23.45■■□□□ 1.34
OPHN1O60890 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC23.45■■□□□ 1.34
OPHN1O60890 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
OPHN1O60890 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
OPHN1O60890 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
OPHN1O60890 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
OPHN1O60890 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
OPHN1O60890 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
OPHN1O60890 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
OPHN1O60890 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
OPHN1O60890 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
OPHN1O60890 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
OPHN1O60890 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
OPHN1O60890 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
OPHN1O60890 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
OPHN1O60890 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
OPHN1O60890 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
OPHN1O60890 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.43■■□□□ 1.34
OPHN1O60890 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
OPHN1O60890 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.43■■□□□ 1.34
OPHN1O60890 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
OPHN1O60890 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.43■■□□□ 1.34
OPHN1O60890 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.43■■□□□ 1.34
OPHN1O60890 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.42■■□□□ 1.34
OPHN1O60890 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.42■■□□□ 1.34
OPHN1O60890 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
OPHN1O60890 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
OPHN1O60890 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
OPHN1O60890 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.42■■□□□ 1.34
OPHN1O60890 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.42■■□□□ 1.34
OPHN1O60890 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC23.42■■□□□ 1.34
OPHN1O60890 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.42■■□□□ 1.34
OPHN1O60890 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.42■■□□□ 1.34
OPHN1O60890 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
OPHN1O60890 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.42■■□□□ 1.34
OPHN1O60890 AC131274.2-201ENST00000580697 1507 ntBASIC23.42■■□□□ 1.34
OPHN1O60890 AC133561.1-201ENST00000568600 2415 ntBASIC23.42■■□□□ 1.34
OPHN1O60890 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
OPHN1O60890 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.41■■□□□ 1.34
OPHN1O60890 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
OPHN1O60890 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
OPHN1O60890 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.41■■□□□ 1.34
OPHN1O60890 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.41■■□□□ 1.34
OPHN1O60890 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.41■■□□□ 1.34
OPHN1O60890 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
OPHN1O60890 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
OPHN1O60890 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
OPHN1O60890 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
OPHN1O60890 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
OPHN1O60890 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.4■■□□□ 1.34
OPHN1O60890 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
OPHN1O60890 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
OPHN1O60890 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
OPHN1O60890 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
OPHN1O60890 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
OPHN1O60890 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.39■■□□□ 1.34
OPHN1O60890 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.39■■□□□ 1.34
OPHN1O60890 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
OPHN1O60890 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
OPHN1O60890 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.39■■□□□ 1.33
OPHN1O60890 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.39■■□□□ 1.33
OPHN1O60890 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC23.39■■□□□ 1.33
OPHN1O60890 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.39■■□□□ 1.33
OPHN1O60890 AC133561.4-201ENST00000566112 224 ntBASIC23.39■■□□□ 1.33
OPHN1O60890 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
OPHN1O60890 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
OPHN1O60890 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC23.39■■□□□ 1.33
OPHN1O60890 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.39■■□□□ 1.33
OPHN1O60890 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
OPHN1O60890 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.38■■□□□ 1.33
OPHN1O60890 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC23.38■■□□□ 1.33
OPHN1O60890 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.38■■□□□ 1.33
OPHN1O60890 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
OPHN1O60890 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.38■■□□□ 1.33
OPHN1O60890 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC23.38■■□□□ 1.33
OPHN1O60890 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.38■■□□□ 1.33
OPHN1O60890 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
OPHN1O60890 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
OPHN1O60890 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
OPHN1O60890 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
OPHN1O60890 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.37■■□□□ 1.33
OPHN1O60890 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.37■■□□□ 1.33
OPHN1O60890 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC23.37■■□□□ 1.33
OPHN1O60890 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.37■■□□□ 1.33
OPHN1O60890 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.37■■□□□ 1.33
OPHN1O60890 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
OPHN1O60890 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.36■■□□□ 1.33
OPHN1O60890 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
OPHN1O60890 AF131216.4-201ENST00000638924 1588 ntBASIC23.36■■□□□ 1.33
OPHN1O60890 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
OPHN1O60890 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
OPHN1O60890 MIR4466-201ENST00000606121 54 ntBASIC23.36■■□□□ 1.33
OPHN1O60890 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
OPHN1O60890 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
OPHN1O60890 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
OPHN1O60890 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC23.36■■□□□ 1.33
OPHN1O60890 DUSP8P5-201ENST00000422884 1815 ntBASIC23.36■■□□□ 1.33
OPHN1O60890 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms