Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.41■■□□□ 1.18
ZFC3H1O60293 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
ZFC3H1O60293 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.4■■□□□ 1.18
ZFC3H1O60293 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.4■■□□□ 1.18
ZFC3H1O60293 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
ZFC3H1O60293 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.39■■□□□ 1.18
ZFC3H1O60293 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
ZFC3H1O60293 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
ZFC3H1O60293 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
ZFC3H1O60293 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.39■■□□□ 1.18
ZFC3H1O60293 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
ZFC3H1O60293 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZFC3H1O60293 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZFC3H1O60293 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.39■■□□□ 1.17
ZFC3H1O60293 SUDS3P1-201ENST00000505831 966 ntBASIC22.39■■□□□ 1.17
ZFC3H1O60293 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
ZFC3H1O60293 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.38■■□□□ 1.17
ZFC3H1O60293 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC22.38■■□□□ 1.17
ZFC3H1O60293 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.38■■□□□ 1.17
ZFC3H1O60293 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC22.38■■□□□ 1.17
ZFC3H1O60293 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ZFC3H1O60293 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
ZFC3H1O60293 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZFC3H1O60293 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
ZFC3H1O60293 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFC3H1O60293 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.37■■□□□ 1.17
ZFC3H1O60293 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFC3H1O60293 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFC3H1O60293 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC22.37■■□□□ 1.17
ZFC3H1O60293 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.37■■□□□ 1.17
ZFC3H1O60293 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.37■■□□□ 1.17
ZFC3H1O60293 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFC3H1O60293 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ZFC3H1O60293 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ZFC3H1O60293 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFC3H1O60293 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ZFC3H1O60293 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZFC3H1O60293 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.36■■□□□ 1.17
ZFC3H1O60293 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ZFC3H1O60293 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.35■■□□□ 1.17
ZFC3H1O60293 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ZFC3H1O60293 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.35■■□□□ 1.17
ZFC3H1O60293 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ZFC3H1O60293 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFC3H1O60293 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZFC3H1O60293 C17orf82-201ENST00000623772 1530 ntBASIC22.35■■□□□ 1.17
ZFC3H1O60293 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.34■■□□□ 1.17
ZFC3H1O60293 REST-206ENST00000612429 1376 ntTSL 5 BASIC22.34■■□□□ 1.17
ZFC3H1O60293 REST-207ENST00000616975 1370 ntTSL 5 BASIC22.34■■□□□ 1.17
ZFC3H1O60293 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
ZFC3H1O60293 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFC3H1O60293 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.34■■□□□ 1.17
ZFC3H1O60293 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.34■■□□□ 1.17
ZFC3H1O60293 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZFC3H1O60293 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZFC3H1O60293 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZFC3H1O60293 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
ZFC3H1O60293 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.33■■□□□ 1.17
ZFC3H1O60293 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
ZFC3H1O60293 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ZFC3H1O60293 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC22.32■■□□□ 1.16
ZFC3H1O60293 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.32■■□□□ 1.16
ZFC3H1O60293 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ZFC3H1O60293 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.32■■□□□ 1.16
ZFC3H1O60293 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
ZFC3H1O60293 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZFC3H1O60293 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.31■■□□□ 1.16
ZFC3H1O60293 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.31■■□□□ 1.16
ZFC3H1O60293 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.31■■□□□ 1.16
ZFC3H1O60293 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
ZFC3H1O60293 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZFC3H1O60293 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ZFC3H1O60293 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms