Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
URB1O60287 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.36■■□□□ 1.01
URB1O60287 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.36■■□□□ 1.01
URB1O60287 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.36■■□□□ 1.01
URB1O60287 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
URB1O60287 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.36■■□□□ 1.01
URB1O60287 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
URB1O60287 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
URB1O60287 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
URB1O60287 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
URB1O60287 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.35■■□□□ 1.01
URB1O60287 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.35■■□□□ 1.01
URB1O60287 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
URB1O60287 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
URB1O60287 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
URB1O60287 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.35■■□□□ 1.01
URB1O60287 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.35■■□□□ 1.01
URB1O60287 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
URB1O60287 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
URB1O60287 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
URB1O60287 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
URB1O60287 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.35■■□□□ 1.01
URB1O60287 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.35■■□□□ 1.01
URB1O60287 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.35■■□□□ 1.01
URB1O60287 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
URB1O60287 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.34■■□□□ 1.01
URB1O60287 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.34■■□□□ 1.01
URB1O60287 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
URB1O60287 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.34■■□□□ 1.01
URB1O60287 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
URB1O60287 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC21.34■■□□□ 1.01
URB1O60287 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.34■■□□□ 1.01
URB1O60287 IGHV3-19-201ENST00000521488 291 ntBASIC21.34■■□□□ 1.01
URB1O60287 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
URB1O60287 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC21.33■■□□□ 1
URB1O60287 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
URB1O60287 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
URB1O60287 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.32■■□□□ 1
URB1O60287 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
URB1O60287 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.32■■□□□ 1
URB1O60287 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.32■■□□□ 1
URB1O60287 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC21.32■■□□□ 1
URB1O60287 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
URB1O60287 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
URB1O60287 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.32■■□□□ 1
URB1O60287 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.32■■□□□ 1
URB1O60287 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
URB1O60287 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.32■■□□□ 1
URB1O60287 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
URB1O60287 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.32■■□□□ 1
URB1O60287 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
URB1O60287 AC096887.2-201ENST00000623443 1957 ntBASIC21.31■■□□□ 1
URB1O60287 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 AC006015.1-201ENST00000429970 570 ntBASIC21.31■■□□□ 1
URB1O60287 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.31■■□□□ 1
URB1O60287 AC137761.2-201ENST00000561729 223 ntBASIC21.31■■□□□ 1
URB1O60287 AC145350.3-201ENST00000569033 163 ntBASIC21.31■■□□□ 1
URB1O60287 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.31■■□□□ 1
URB1O60287 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 AC009086.3-201ENST00000623486 1008 ntBASIC21.31■■□□□ 1
URB1O60287 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.31■■□□□ 1
URB1O60287 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.31■■□□□ 1
URB1O60287 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
URB1O60287 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.31■■□□□ 1
URB1O60287 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
URB1O60287 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.3■■□□□ 1
URB1O60287 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.3■■□□□ 1
URB1O60287 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.3■■□□□ 1
URB1O60287 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
URB1O60287 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.3■■□□□ 1
URB1O60287 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
URB1O60287 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
URB1O60287 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.3■■□□□ 1
URB1O60287 AL355802.2-201ENST00000402069 882 ntBASIC21.3■■□□□ 1
URB1O60287 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
URB1O60287 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.3■■□□□ 1
URB1O60287 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC21.3■■□□□ 1
URB1O60287 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.3■■□□□ 1
URB1O60287 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.3■■□□□ 1
URB1O60287 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.3■■□□□ 1
URB1O60287 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.29■■□□□ 1
URB1O60287 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.29■■□□□ 1
URB1O60287 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.29■■□□□ 1
URB1O60287 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms