Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH7O60245 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH7O60245 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH7O60245 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PCDH7O60245 DUSP8P3-201ENST00000399571 1760 ntBASIC21.56■■□□□ 1.04
PCDH7O60245 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.56■■□□□ 1.04
PCDH7O60245 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.55■■□□□ 1.04
PCDH7O60245 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH7O60245 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.55■■□□□ 1.04
PCDH7O60245 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH7O60245 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
PCDH7O60245 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
PCDH7O60245 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PCDH7O60245 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH7O60245 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH7O60245 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PCDH7O60245 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH7O60245 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH7O60245 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH7O60245 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH7O60245 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH7O60245 BX664725.1-201ENST00000438252 379 ntBASIC21.54■■□□□ 1.04
PCDH7O60245 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.54■■□□□ 1.04
PCDH7O60245 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.54■■□□□ 1.04
PCDH7O60245 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH7O60245 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH7O60245 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PCDH7O60245 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PCDH7O60245 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.54■■□□□ 1.04
PCDH7O60245 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH7O60245 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH7O60245 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH7O60245 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH7O60245 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH7O60245 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH7O60245 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH7O60245 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH7O60245 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC21.53■■□□□ 1.04
PCDH7O60245 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.53■■□□□ 1.04
PCDH7O60245 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.53■■□□□ 1.04
PCDH7O60245 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PCDH7O60245 AC021242.3-201ENST00000607598 1377 ntBASIC21.52■■□□□ 1.04
PCDH7O60245 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH7O60245 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH7O60245 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH7O60245 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.52■■□□□ 1.04
PCDH7O60245 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH7O60245 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH7O60245 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH7O60245 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PCDH7O60245 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
PCDH7O60245 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.52■■□□□ 1.04
PCDH7O60245 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
PCDH7O60245 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
PCDH7O60245 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH7O60245 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH7O60245 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH7O60245 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
PCDH7O60245 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH7O60245 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDH7O60245 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH7O60245 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
PCDH7O60245 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PCDH7O60245 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH7O60245 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH7O60245 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH7O60245 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH7O60245 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
PCDH7O60245 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH7O60245 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH7O60245 RARRES2P1-201ENST00000474487 481 ntBASIC21.5■■□□□ 1.03
PCDH7O60245 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDH7O60245 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH7O60245 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDH7O60245 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH7O60245 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH7O60245 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH7O60245 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH7O60245 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
PCDH7O60245 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH7O60245 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH7O60245 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PCDH7O60245 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH7O60245 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH7O60245 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH7O60245 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH7O60245 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDH7O60245 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.49■■□□□ 1.03
PCDH7O60245 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH7O60245 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDH7O60245 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH7O60245 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDH7O60245 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH7O60245 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH7O60245 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH7O60245 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH7O60245 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.48■■□□□ 1.03
PCDH7O60245 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH7O60245 AC079630.1-202ENST00000618127 1840 ntBASIC21.48■■□□□ 1.03
PCDH7O60245 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms