Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 AL161729.1-201ENST00000604104 1402 ntBASIC19.26■□□□□ 0.67
SSX5O60225 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.26■□□□□ 0.67
SSX5O60225 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SSX5O60225 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX5O60225 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.26■□□□□ 0.67
SSX5O60225 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.26■□□□□ 0.67
SSX5O60225 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX5O60225 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX5O60225 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SSX5O60225 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.26■□□□□ 0.67
SSX5O60225 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX5O60225 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SSX5O60225 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SSX5O60225 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX5O60225 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.25■□□□□ 0.67
SSX5O60225 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SSX5O60225 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.25■□□□□ 0.67
SSX5O60225 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC19.25■□□□□ 0.67
SSX5O60225 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SSX5O60225 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.24■□□□□ 0.67
SSX5O60225 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.24■□□□□ 0.67
SSX5O60225 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SSX5O60225 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SSX5O60225 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX5O60225 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.23■□□□□ 0.67
SSX5O60225 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.23■□□□□ 0.67
SSX5O60225 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SSX5O60225 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.23■□□□□ 0.67
SSX5O60225 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SSX5O60225 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.22■□□□□ 0.67
SSX5O60225 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 AC009831.1-201ENST00000580420 1582 ntBASIC19.22■□□□□ 0.67
SSX5O60225 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.22■□□□□ 0.67
SSX5O60225 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SSX5O60225 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
SSX5O60225 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SSX5O60225 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SSX5O60225 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.21■□□□□ 0.67
SSX5O60225 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 ECEL1P1-201ENST00000373592 1742 ntBASIC19.21■□□□□ 0.67
SSX5O60225 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSX5O60225 RPS2P7-201ENST00000447334 885 ntBASIC19.21■□□□□ 0.67
SSX5O60225 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.21■□□□□ 0.67
SSX5O60225 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SSX5O60225 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
SSX5O60225 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
SSX5O60225 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
SSX5O60225 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX5O60225 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX5O60225 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SSX5O60225 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SSX5O60225 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms