Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6DO43924 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PDE6DO43924 EI24-213ENST00000618552 1747 ntTSL 5 BASIC17.51■□□□□ 0.39
PDE6DO43924 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PDE6DO43924 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
PDE6DO43924 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6DO43924 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6DO43924 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PDE6DO43924 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.51■□□□□ 0.39
PDE6DO43924 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
PDE6DO43924 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6DO43924 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6DO43924 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PDE6DO43924 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6DO43924 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.5■□□□□ 0.39
PDE6DO43924 PFN2-211ENST00000489155 636 ntTSL 4 BASIC17.5■□□□□ 0.39
PDE6DO43924 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6DO43924 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PDE6DO43924 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PDE6DO43924 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PDE6DO43924 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
PDE6DO43924 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6DO43924 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC17.49■□□□□ 0.39
PDE6DO43924 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PDE6DO43924 LINC01971-201ENST00000617888 1048 ntBASIC17.49■□□□□ 0.39
PDE6DO43924 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6DO43924 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6DO43924 C11orf96-202ENST00000528572 1834 ntBASIC17.49■□□□□ 0.39
PDE6DO43924 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PDE6DO43924 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6DO43924 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6DO43924 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6DO43924 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.48■□□□□ 0.39
PDE6DO43924 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6DO43924 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6DO43924 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
PDE6DO43924 AC092053.2-201ENST00000640557 1818 ntBASIC17.48■□□□□ 0.39
PDE6DO43924 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6DO43924 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PDE6DO43924 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PDE6DO43924 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PDE6DO43924 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.47■□□□□ 0.39
PDE6DO43924 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6DO43924 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PDE6DO43924 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PDE6DO43924 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PDE6DO43924 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PDE6DO43924 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6DO43924 HLA-V-202ENST00000446817 847 ntBASIC17.47■□□□□ 0.39
PDE6DO43924 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PDE6DO43924 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.47■□□□□ 0.39
PDE6DO43924 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.47■□□□□ 0.39
PDE6DO43924 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
PDE6DO43924 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.47■□□□□ 0.39
PDE6DO43924 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PDE6DO43924 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6DO43924 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6DO43924 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
PDE6DO43924 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6DO43924 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6DO43924 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.46■□□□□ 0.39
PDE6DO43924 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6DO43924 MIR3960-201ENST00000583311 91 ntBASIC17.46■□□□□ 0.39
PDE6DO43924 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6DO43924 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PDE6DO43924 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.45■□□□□ 0.38
PDE6DO43924 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6DO43924 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6DO43924 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6DO43924 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
PDE6DO43924 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
PDE6DO43924 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6DO43924 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6DO43924 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6DO43924 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PDE6DO43924 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PDE6DO43924 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.44■□□□□ 0.38
PDE6DO43924 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PDE6DO43924 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6DO43924 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC17.43■□□□□ 0.38
PDE6DO43924 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PDE6DO43924 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PDE6DO43924 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms