Protein–RNA interactions for Protein: O15258

RER1, Protein RER1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RER1O15258 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RER1O15258 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RER1O15258 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RER1O15258 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.84■□□□□ 0.77
RER1O15258 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RER1O15258 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RER1O15258 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RER1O15258 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RER1O15258 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RER1O15258 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.83■□□□□ 0.77
RER1O15258 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.83■□□□□ 0.77
RER1O15258 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RER1O15258 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RER1O15258 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.83■□□□□ 0.76
RER1O15258 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
RER1O15258 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RER1O15258 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RER1O15258 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.83■□□□□ 0.76
RER1O15258 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.83■□□□□ 0.76
RER1O15258 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.83■□□□□ 0.76
RER1O15258 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RER1O15258 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RER1O15258 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RER1O15258 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RER1O15258 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RER1O15258 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.82■□□□□ 0.76
RER1O15258 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RER1O15258 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.82■□□□□ 0.76
RER1O15258 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.82■□□□□ 0.76
RER1O15258 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RER1O15258 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RER1O15258 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC19.82■□□□□ 0.76
RER1O15258 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.82■□□□□ 0.76
RER1O15258 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RER1O15258 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RER1O15258 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RER1O15258 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RER1O15258 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RER1O15258 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RER1O15258 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RER1O15258 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.81■□□□□ 0.76
RER1O15258 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RER1O15258 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.8■□□□□ 0.76
RER1O15258 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RER1O15258 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RER1O15258 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RER1O15258 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RER1O15258 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RER1O15258 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC19.8■□□□□ 0.76
RER1O15258 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.8■□□□□ 0.76
RER1O15258 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RER1O15258 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
RER1O15258 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.8■□□□□ 0.76
RER1O15258 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RER1O15258 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC19.8■□□□□ 0.76
RER1O15258 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RER1O15258 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.79■□□□□ 0.76
RER1O15258 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RER1O15258 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RER1O15258 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RER1O15258 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RER1O15258 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.79■□□□□ 0.76
RER1O15258 KRT125P-201ENST00000546827 989 ntBASIC19.79■□□□□ 0.76
RER1O15258 AL451085.2-201ENST00000605085 799 ntBASIC19.79■□□□□ 0.76
RER1O15258 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RER1O15258 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RER1O15258 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RER1O15258 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.79■□□□□ 0.76
RER1O15258 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.78■□□□□ 0.76
RER1O15258 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RER1O15258 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
RER1O15258 DUSP8P3-201ENST00000399571 1760 ntBASIC19.78■□□□□ 0.76
RER1O15258 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RER1O15258 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RER1O15258 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RER1O15258 AC009299.2-201ENST00000482477 511 ntBASIC19.78■□□□□ 0.76
RER1O15258 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.78■□□□□ 0.76
RER1O15258 Z92544.1-202ENST00000571933 1220 ntBASIC19.78■□□□□ 0.76
RER1O15258 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.78■□□□□ 0.76
RER1O15258 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RER1O15258 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RER1O15258 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RER1O15258 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RER1O15258 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC19.77■□□□□ 0.76
RER1O15258 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RER1O15258 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
RER1O15258 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC19.77■□□□□ 0.76
RER1O15258 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.77■□□□□ 0.76
RER1O15258 AC239859.2-201ENST00000444165 318 ntBASIC19.77■□□□□ 0.76
RER1O15258 AC092028.1-203ENST00000608262 953 ntBASIC19.77■□□□□ 0.76
RER1O15258 MIR6722-201ENST00000617286 78 ntBASIC19.77■□□□□ 0.76
RER1O15258 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
RER1O15258 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC19.77■□□□□ 0.76
RER1O15258 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
RER1O15258 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.77■□□□□ 0.76
RER1O15258 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
RER1O15258 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
RER1O15258 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RER1O15258 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RER1O15258 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms