Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH17O14917 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDH17O14917 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDH17O14917 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH17O14917 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PCDH17O14917 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
PCDH17O14917 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDH17O14917 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDH17O14917 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PCDH17O14917 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 HLA-L-211ENST00000482052 1765 ntBASIC21.49■■□□□ 1.03
PCDH17O14917 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PCDH17O14917 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 DUSP8P5-201ENST00000422884 1815 ntBASIC21.49■■□□□ 1.03
PCDH17O14917 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
PCDH17O14917 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH17O14917 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDH17O14917 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDH17O14917 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH17O14917 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH17O14917 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH17O14917 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH17O14917 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH17O14917 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH17O14917 MIR935-201ENST00000401179 91 ntBASIC21.48■■□□□ 1.03
PCDH17O14917 AL136116.3-201ENST00000402907 1138 ntBASIC21.48■■□□□ 1.03
PCDH17O14917 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDH17O14917 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH17O14917 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH17O14917 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
PCDH17O14917 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH17O14917 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH17O14917 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH17O14917 AL512631.2-201ENST00000604634 923 ntBASIC21.47■■□□□ 1.03
PCDH17O14917 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PCDH17O14917 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH17O14917 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDH17O14917 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH17O14917 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH17O14917 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH17O14917 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH17O14917 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDH17O14917 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PCDH17O14917 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH17O14917 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PCDH17O14917 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH17O14917 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH17O14917 MIR638-201ENST00000385237 100 ntBASIC21.45■■□□□ 1.02
PCDH17O14917 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDH17O14917 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH17O14917 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH17O14917 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH17O14917 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.45■■□□□ 1.02
PCDH17O14917 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDH17O14917 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.44■■□□□ 1.02
PCDH17O14917 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH17O14917 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
PCDH17O14917 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PCDH17O14917 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDH17O14917 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH17O14917 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.44■■□□□ 1.02
PCDH17O14917 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDH17O14917 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
PCDH17O14917 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.44■■□□□ 1.02
PCDH17O14917 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDH17O14917 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH17O14917 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH17O14917 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH17O14917 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH17O14917 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH17O14917 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PCDH17O14917 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.43■■□□□ 1.02
PCDH17O14917 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDH17O14917 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDH17O14917 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
PCDH17O14917 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.42■■□□□ 1.02
PCDH17O14917 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDH17O14917 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.42■■□□□ 1.02
PCDH17O14917 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
PCDH17O14917 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.42■■□□□ 1.02
PCDH17O14917 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 MIR4466-201ENST00000606121 54 ntBASIC21.42■■□□□ 1.02
PCDH17O14917 AL139246.5-201ENST00000606645 996 ntBASIC21.42■■□□□ 1.02
PCDH17O14917 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
PCDH17O14917 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH17O14917 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
PCDH17O14917 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms