Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.27■■■□□ 2.28
CHL1O00533 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
CHL1O00533 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHL1O00533 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC29.27■■■□□ 2.28
CHL1O00533 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
CHL1O00533 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
CHL1O00533 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC29.26■■■□□ 2.28
CHL1O00533 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHL1O00533 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
CHL1O00533 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC29.26■■■□□ 2.27
CHL1O00533 AC106739.1-201ENST00000617035 715 ntBASIC29.26■■■□□ 2.27
CHL1O00533 AC241377.3-202ENST00000626088 1088 ntBASIC29.26■■■□□ 2.27
CHL1O00533 AC241585.3-202ENST00000628937 1088 ntBASIC29.26■■■□□ 2.27
CHL1O00533 AC245100.8-202ENST00000629247 1058 ntBASIC29.26■■■□□ 2.27
CHL1O00533 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHL1O00533 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
CHL1O00533 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC29.26■■■□□ 2.27
CHL1O00533 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHL1O00533 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
CHL1O00533 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHL1O00533 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHL1O00533 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
CHL1O00533 AC133561.4-201ENST00000566112 224 ntBASIC29.25■■■□□ 2.27
CHL1O00533 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHL1O00533 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC29.24■■■□□ 2.27
CHL1O00533 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHL1O00533 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
CHL1O00533 AC006455.2-201ENST00000429931 906 ntBASIC29.24■■■□□ 2.27
CHL1O00533 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC29.24■■■□□ 2.27
CHL1O00533 DUX4L19-201ENST00000557448 1267 ntBASIC29.24■■■□□ 2.27
CHL1O00533 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CHL1O00533 SF1-220ENST00000626028 704 ntTSL 2 BASIC29.24■■■□□ 2.27
CHL1O00533 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.24■■■□□ 2.27
CHL1O00533 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
CHL1O00533 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC29.24■■■□□ 2.27
CHL1O00533 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHL1O00533 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHL1O00533 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHL1O00533 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC29.23■■■□□ 2.27
CHL1O00533 SERBP1P1-201ENST00000396021 1160 ntBASIC29.23■■■□□ 2.27
CHL1O00533 AL136162.1-201ENST00000607711 1078 ntBASIC29.23■■■□□ 2.27
CHL1O00533 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CHL1O00533 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC29.23■■■□□ 2.27
CHL1O00533 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC29.23■■■□□ 2.27
CHL1O00533 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHL1O00533 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHL1O00533 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHL1O00533 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CHL1O00533 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC29.22■■■□□ 2.27
CHL1O00533 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHL1O00533 PBX2P1-201ENST00000493219 1291 ntBASIC29.22■■■□□ 2.27
CHL1O00533 AC024257.2-201ENST00000549699 147 ntBASIC29.22■■■□□ 2.27
CHL1O00533 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC29.22■■■□□ 2.27
CHL1O00533 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CHL1O00533 AC092171.4-201ENST00000609130 632 ntBASIC29.22■■■□□ 2.27
CHL1O00533 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CHL1O00533 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CHL1O00533 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHL1O00533 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHL1O00533 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.21■■■□□ 2.27
CHL1O00533 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHL1O00533 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHL1O00533 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC29.21■■■□□ 2.27
CHL1O00533 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHL1O00533 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC29.21■■■□□ 2.27
CHL1O00533 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC29.21■■■□□ 2.27
CHL1O00533 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC29.21■■■□□ 2.27
CHL1O00533 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC29.2■■■□□ 2.26
CHL1O00533 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC29.2■■■□□ 2.26
CHL1O00533 AL031432.3-201ENST00000607698 485 ntBASIC29.2■■■□□ 2.26
CHL1O00533 SYT6-210ENST00000641643 1587 ntBASIC29.2■■■□□ 2.26
CHL1O00533 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CHL1O00533 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.26
CHL1O00533 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC29.2■■■□□ 2.26
CHL1O00533 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHL1O00533 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CHL1O00533 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC29.19■■■□□ 2.26
CHL1O00533 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.19■■■□□ 2.26
CHL1O00533 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
CHL1O00533 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC29.19■■■□□ 2.26
CHL1O00533 AC135279.3-201ENST00000610945 1311 ntBASIC29.19■■■□□ 2.26
CHL1O00533 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CHL1O00533 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHL1O00533 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHL1O00533 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC29.18■■■□□ 2.26
CHL1O00533 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHL1O00533 AC005837.3-201ENST00000612163 286 ntBASIC29.18■■■□□ 2.26
CHL1O00533 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
CHL1O00533 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHL1O00533 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHL1O00533 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CHL1O00533 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC29.17■■■□□ 2.26
CHL1O00533 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
CHL1O00533 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
CHL1O00533 PTCHD3P2-201ENST00000424937 1205 ntBASIC29.16■■■□□ 2.26
CHL1O00533 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC29.16■■■□□ 2.26
CHL1O00533 MIR3181-201ENST00000578512 73 ntBASIC29.16■■■□□ 2.26
CHL1O00533 AL138724.1-201ENST00000606771 1088 ntBASIC29.16■■■□□ 2.26
CHL1O00533 AC009086.3-201ENST00000623486 1008 ntBASIC29.16■■■□□ 2.26
CHL1O00533 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms