Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 AL592293.1-201ENST00000502889 1188 ntBASIC20.87■□□□□ 0.93
TNFRSF11BO00300 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TNFRSF11BO00300 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 ALDH1A3-203ENST00000557963 1670 ntBASIC20.86■□□□□ 0.93
TNFRSF11BO00300 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TNFRSF11BO00300 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 AC127496.7-201ENST00000625110 1798 ntBASIC20.85■□□□□ 0.93
TNFRSF11BO00300 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 MIR4449-201ENST00000578365 66 ntBASIC20.85■□□□□ 0.93
TNFRSF11BO00300 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TNFRSF11BO00300 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 PKD1P6-201ENST00000343738 4769 ntBASIC20.84■□□□□ 0.93
TNFRSF11BO00300 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TNFRSF11BO00300 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFRSF11BO00300 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TNFRSF11BO00300 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
TNFRSF11BO00300 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.83■□□□□ 0.93
TNFRSF11BO00300 MIR6765-201ENST00000614092 87 ntBASIC20.83■□□□□ 0.93
TNFRSF11BO00300 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.83■□□□□ 0.92
TNFRSF11BO00300 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFRSF11BO00300 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TNFRSF11BO00300 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 AC131274.2-201ENST00000580697 1507 ntBASIC20.82■□□□□ 0.92
TNFRSF11BO00300 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TNFRSF11BO00300 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
TNFRSF11BO00300 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF11BO00300 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF11BO00300 RNF126P1-201ENST00000567452 1320 ntBASIC20.8■□□□□ 0.92
TNFRSF11BO00300 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF11BO00300 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF11BO00300 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
TNFRSF11BO00300 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF11BO00300 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
TNFRSF11BO00300 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
TNFRSF11BO00300 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms