Protein–RNA interactions for Protein: O00241

SIRPB1, Signal-regulatory protein beta-1, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB1O00241 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPB1O00241 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SIRPB1O00241 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.04■□□□□ 0.64
SIRPB1O00241 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPB1O00241 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPB1O00241 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPB1O00241 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPB1O00241 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPB1O00241 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.03■□□□□ 0.64
SIRPB1O00241 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPB1O00241 AC068473.5-201ENST00000616428 2072 ntBASIC19.03■□□□□ 0.64
SIRPB1O00241 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.03■□□□□ 0.64
SIRPB1O00241 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPB1O00241 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SIRPB1O00241 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.03■□□□□ 0.64
SIRPB1O00241 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SIRPB1O00241 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIRPB1O00241 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SIRPB1O00241 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.02■□□□□ 0.64
SIRPB1O00241 AC137630.3-201ENST00000607245 391 ntBASIC19.02■□□□□ 0.64
SIRPB1O00241 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.02■□□□□ 0.64
SIRPB1O00241 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
SIRPB1O00241 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
SIRPB1O00241 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
SIRPB1O00241 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SIRPB1O00241 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIRPB1O00241 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIRPB1O00241 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIRPB1O00241 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SIRPB1O00241 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIRPB1O00241 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIRPB1O00241 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
SIRPB1O00241 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
SIRPB1O00241 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIRPB1O00241 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.01■□□□□ 0.63
SIRPB1O00241 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.01■□□□□ 0.63
SIRPB1O00241 SNX5-217ENST00000606557 1087 ntBASIC19.01■□□□□ 0.63
SIRPB1O00241 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SIRPB1O00241 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.01■□□□□ 0.63
SIRPB1O00241 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.01■□□□□ 0.63
SIRPB1O00241 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19■□□□□ 0.63
SIRPB1O00241 BX664725.1-201ENST00000438252 379 ntBASIC19■□□□□ 0.63
SIRPB1O00241 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19■□□□□ 0.63
SIRPB1O00241 RARRES2P1-201ENST00000474487 481 ntBASIC19■□□□□ 0.63
SIRPB1O00241 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19■□□□□ 0.63
SIRPB1O00241 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19■□□□□ 0.63
SIRPB1O00241 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19■□□□□ 0.63
SIRPB1O00241 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19■□□□□ 0.63
SIRPB1O00241 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 AC092068.2-201ENST00000590491 1708 ntBASIC19■□□□□ 0.63
SIRPB1O00241 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19■□□□□ 0.63
SIRPB1O00241 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SIRPB1O00241 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIRPB1O00241 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIRPB1O00241 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIRPB1O00241 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIRPB1O00241 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.99■□□□□ 0.63
SIRPB1O00241 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.99■□□□□ 0.63
SIRPB1O00241 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.99■□□□□ 0.63
SIRPB1O00241 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.99■□□□□ 0.63
SIRPB1O00241 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SIRPB1O00241 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.98■□□□□ 0.63
SIRPB1O00241 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SIRPB1O00241 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPB1O00241 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.98■□□□□ 0.63
SIRPB1O00241 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.98■□□□□ 0.63
SIRPB1O00241 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPB1O00241 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.98■□□□□ 0.63
SIRPB1O00241 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPB1O00241 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SIRPB1O00241 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPB1O00241 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SIRPB1O00241 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SIRPB1O00241 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.97■□□□□ 0.63
SIRPB1O00241 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPB1O00241 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SIRPB1O00241 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.97■□□□□ 0.63
SIRPB1O00241 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.97■□□□□ 0.63
SIRPB1O00241 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC18.97■□□□□ 0.63
SIRPB1O00241 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
SIRPB1O00241 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SIRPB1O00241 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.97■□□□□ 0.63
SIRPB1O00241 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
SIRPB1O00241 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPB1O00241 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPB1O00241 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
SIRPB1O00241 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPB1O00241 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SIRPB1O00241 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.96■□□□□ 0.63
SIRPB1O00241 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.96■□□□□ 0.63
SIRPB1O00241 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SIRPB1O00241 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms