Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.04■□□□□ 0.48
CGB1A6NKQ9 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 AC103724.3-201ENST00000564481 992 ntBASIC18.03■□□□□ 0.48
CGB1A6NKQ9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CGB1A6NKQ9 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 AC004448.1-201ENST00000458332 883 ntBASIC18.02■□□□□ 0.48
CGB1A6NKQ9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 KRT8P33-201ENST00000508125 1423 ntBASIC18.02■□□□□ 0.48
CGB1A6NKQ9 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CGB1A6NKQ9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
CGB1A6NKQ9 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
CGB1A6NKQ9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CGB1A6NKQ9 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CGB1A6NKQ9 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CGB1A6NKQ9 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CGB1A6NKQ9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.01■□□□□ 0.47
CGB1A6NKQ9 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CGB1A6NKQ9 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CGB1A6NKQ9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18■□□□□ 0.47
CGB1A6NKQ9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18■□□□□ 0.47
CGB1A6NKQ9 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18■□□□□ 0.47
CGB1A6NKQ9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CGB1A6NKQ9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18■□□□□ 0.47
CGB1A6NKQ9 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18■□□□□ 0.47
CGB1A6NKQ9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18■□□□□ 0.47
CGB1A6NKQ9 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC18■□□□□ 0.47
CGB1A6NKQ9 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CGB1A6NKQ9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CGB1A6NKQ9 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CGB1A6NKQ9 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CGB1A6NKQ9 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CGB1A6NKQ9 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CGB1A6NKQ9 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
CGB1A6NKQ9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 YBX1P4-201ENST00000392794 808 ntBASIC17.96■□□□□ 0.47
CGB1A6NKQ9 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CGB1A6NKQ9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CGB1A6NKQ9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms