Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.18■□□□□ 0.98
PRAMEF25A6NGN4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
PRAMEF25A6NGN4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF25A6NGN4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF25A6NGN4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.16■□□□□ 0.98
PRAMEF25A6NGN4 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
PRAMEF25A6NGN4 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC21.16■□□□□ 0.98
PRAMEF25A6NGN4 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.16■□□□□ 0.98
PRAMEF25A6NGN4 AC092028.1-203ENST00000608262 953 ntBASIC21.16■□□□□ 0.98
PRAMEF25A6NGN4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 AC092068.2-201ENST00000590491 1708 ntBASIC21.15■□□□□ 0.98
PRAMEF25A6NGN4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.14■□□□□ 0.98
PRAMEF25A6NGN4 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.14■□□□□ 0.98
PRAMEF25A6NGN4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 TSPY9P-201ENST00000440215 945 ntBASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 TSPY11P-201ENST00000442607 1045 ntBASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.14■□□□□ 0.97
PRAMEF25A6NGN4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF25A6NGN4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.13■□□□□ 0.97
PRAMEF25A6NGN4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
PRAMEF25A6NGN4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.13■□□□□ 0.97
PRAMEF25A6NGN4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF25A6NGN4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
PRAMEF25A6NGN4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.13■□□□□ 0.97
PRAMEF25A6NGN4 AC131274.2-201ENST00000580697 1507 ntBASIC21.13■□□□□ 0.97
PRAMEF25A6NGN4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 AL022069.1-201ENST00000568025 1636 ntBASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 SNX5-217ENST00000606557 1087 ntBASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
PRAMEF25A6NGN4 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 AL161729.1-201ENST00000604104 1402 ntBASIC21.11■□□□□ 0.97
PRAMEF25A6NGN4 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms