Protein–RNA interactions for Protein: A6NCL2

LRCOL1, Leucine-rich colipase-like protein 1, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCOL1A6NCL2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LRCOL1A6NCL2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
LRCOL1A6NCL2 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 SRD5A1P1-201ENST00000442297 786 ntBASIC15.04■□□□□ -0
LRCOL1A6NCL2 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.04■□□□□ -0
LRCOL1A6NCL2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
LRCOL1A6NCL2 AC020928.2-201ENST00000588717 2197 ntBASIC15.04■□□□□ -0
LRCOL1A6NCL2 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC15.04■□□□□ -0
LRCOL1A6NCL2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.03■□□□□ -0
LRCOL1A6NCL2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCOL1A6NCL2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LRCOL1A6NCL2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LRCOL1A6NCL2 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC15.03■□□□□ -0
LRCOL1A6NCL2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC15.03■□□□□ -0
LRCOL1A6NCL2 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
LRCOL1A6NCL2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCOL1A6NCL2 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRCOL1A6NCL2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCOL1A6NCL2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC15.02■□□□□ -0
LRCOL1A6NCL2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LRCOL1A6NCL2 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRCOL1A6NCL2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LRCOL1A6NCL2 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
LRCOL1A6NCL2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC15.02■□□□□ -0
LRCOL1A6NCL2 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC15.02■□□□□ -0
LRCOL1A6NCL2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
LRCOL1A6NCL2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC15.02■□□□□ -0
LRCOL1A6NCL2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRCOL1A6NCL2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC15.02□□□□□ -0.01
LRCOL1A6NCL2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LRCOL1A6NCL2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRCOL1A6NCL2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LRCOL1A6NCL2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
LRCOL1A6NCL2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
LRCOL1A6NCL2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC15.01□□□□□ -0.01
LRCOL1A6NCL2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 AC009102.2-201ENST00000606772 1639 ntBASIC15□□□□□ -0.01
LRCOL1A6NCL2 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC15□□□□□ -0.01
LRCOL1A6NCL2 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15□□□□□ -0.01
LRCOL1A6NCL2 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 AC133561.4-201ENST00000566112 224 ntBASIC15□□□□□ -0.01
LRCOL1A6NCL2 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC15□□□□□ -0.01
LRCOL1A6NCL2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC15□□□□□ -0.01
LRCOL1A6NCL2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
LRCOL1A6NCL2 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LRCOL1A6NCL2 ALDH1A3-203ENST00000557963 1670 ntBASIC15□□□□□ -0.01
LRCOL1A6NCL2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 UNC93B3-201ENST00000308076 687 ntBASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LRCOL1A6NCL2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 AC106739.1-201ENST00000617035 715 ntBASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC14.98□□□□□ -0.01
LRCOL1A6NCL2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCOL1A6NCL2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LRCOL1A6NCL2 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
LRCOL1A6NCL2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LRCOL1A6NCL2 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC14.97□□□□□ -0.01
LRCOL1A6NCL2 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms