Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 AC021242.3-201ENST00000607598 1377 ntBASIC20.77■□□□□ 0.92
CDHR4A6H8M9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDHR4A6H8M9 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CDHR4A6H8M9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
CDHR4A6H8M9 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 BX664725.1-201ENST00000438252 379 ntBASIC20.74■□□□□ 0.91
CDHR4A6H8M9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CDHR4A6H8M9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CDHR4A6H8M9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CDHR4A6H8M9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 RARRES2P1-201ENST00000474487 481 ntBASIC20.71■□□□□ 0.91
CDHR4A6H8M9 RNF146-205ENST00000477776 762 ntTSL 3 BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.71■□□□□ 0.91
CDHR4A6H8M9 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CDHR4A6H8M9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 AC079630.1-202ENST00000618127 1840 ntBASIC20.7■□□□□ 0.9
CDHR4A6H8M9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CDHR4A6H8M9 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms