Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SHISA3A0PJX4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SHISA3A0PJX4 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
SHISA3A0PJX4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SHISA3A0PJX4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHISA3A0PJX4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.78■□□□□ 0.76
SHISA3A0PJX4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHISA3A0PJX4 KRT18P10-201ENST00000388836 1287 ntBASIC19.78■□□□□ 0.76
SHISA3A0PJX4 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SHISA3A0PJX4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
SHISA3A0PJX4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHISA3A0PJX4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHISA3A0PJX4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHISA3A0PJX4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHISA3A0PJX4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.77■□□□□ 0.75
SHISA3A0PJX4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.76■□□□□ 0.75
SHISA3A0PJX4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 AC139530.1-201ENST00000575312 1977 ntBASIC19.76■□□□□ 0.75
SHISA3A0PJX4 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 AC007029.1-201ENST00000604183 313 ntBASIC19.76■□□□□ 0.75
SHISA3A0PJX4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SHISA3A0PJX4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHISA3A0PJX4 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHISA3A0PJX4 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHISA3A0PJX4 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHISA3A0PJX4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHISA3A0PJX4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHISA3A0PJX4 GFER-205ENST00000569451 517 ntTSL 5 BASIC19.73■□□□□ 0.75
SHISA3A0PJX4 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHISA3A0PJX4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHISA3A0PJX4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHISA3A0PJX4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
SHISA3A0PJX4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHISA3A0PJX4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHISA3A0PJX4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms