Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV5S1A1TA0A578 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV5S1A1TA0A578 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
TCRBV5S1A1TA0A578 C9orf163-202ENST00000624034 2573 ntBASIC23.74■■□□□ 1.39
TCRBV5S1A1TA0A578 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
TCRBV5S1A1TA0A578 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.74■■□□□ 1.39
TCRBV5S1A1TA0A578 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 AC079630.1-202ENST00000618127 1840 ntBASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 KRT125P-201ENST00000546827 989 ntBASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
TCRBV5S1A1TA0A578 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCRBV5S1A1TA0A578 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCRBV5S1A1TA0A578 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TCRBV5S1A1TA0A578 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TCRBV5S1A1TA0A578 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC23.72■■□□□ 1.39
TCRBV5S1A1TA0A578 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TCRBV5S1A1TA0A578 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TCRBV5S1A1TA0A578 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TCRBV5S1A1TA0A578 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TCRBV5S1A1TA0A578 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 AC133561.1-201ENST00000568600 2415 ntBASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
TCRBV5S1A1TA0A578 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV5S1A1TA0A578 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
TCRBV5S1A1TA0A578 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.69■■□□□ 1.38
TCRBV5S1A1TA0A578 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.69■■□□□ 1.38
TCRBV5S1A1TA0A578 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.69■■□□□ 1.38
TCRBV5S1A1TA0A578 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 AC005703.6-201ENST00000623265 1329 ntBASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.68■■□□□ 1.38
TCRBV5S1A1TA0A578 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 AL035685.1-201ENST00000636663 812 ntBASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.67■■□□□ 1.38
TCRBV5S1A1TA0A578 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 AC012676.1-201ENST00000574705 1949 ntBASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TCRBV5S1A1TA0A578 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC23.65■■□□□ 1.38
TCRBV5S1A1TA0A578 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.65■■□□□ 1.38
TCRBV5S1A1TA0A578 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.65■■□□□ 1.38
TCRBV5S1A1TA0A578 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.65■■□□□ 1.38
TCRBV5S1A1TA0A578 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TCRBV5S1A1TA0A578 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
TCRBV5S1A1TA0A578 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
TCRBV5S1A1TA0A578 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TCRBV5S1A1TA0A578 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
TCRBV5S1A1TA0A578 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.64■■□□□ 1.37
TCRBV5S1A1TA0A578 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms