Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
LINC00959A0A1B0GUT2 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
LINC00959A0A1B0GUT2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 C1orf229-201ENST00000623686 2258 ntBASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 AC120024.1-201ENST00000562672 995 ntBASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LINC00959A0A1B0GUT2 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 AC074183.2-201ENST00000623112 922 ntBASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LINC00959A0A1B0GUT2 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 IDNK-201ENST00000376417 511 ntTSL 5 BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LINC00959A0A1B0GUT2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00959A0A1B0GUT2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00959A0A1B0GUT2 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.33■□□□□ 0.05
LINC00959A0A1B0GUT2 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00959A0A1B0GUT2 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
LINC00959A0A1B0GUT2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 KRT18P24-201ENST00000344739 1156 ntBASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 THA1P-201ENST00000590384 1145 ntBASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
LINC00959A0A1B0GUT2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LINC00959A0A1B0GUT2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00959A0A1B0GUT2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LINC00959A0A1B0GUT2 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LINC00959A0A1B0GUT2 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms