Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 COMT-203ENST00000403184 2217 ntTSL 2 BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRBV27A0A0K0K1C4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 MIR639-201ENST00000384974 98 ntBASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRBV27A0A0K0K1C4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRBV27A0A0K0K1C4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV27A0A0K0K1C4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRBV27A0A0K0K1C4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV27A0A0K0K1C4 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV27A0A0K0K1C4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV27A0A0K0K1C4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC15.96■□□□□ 0.15
TRBV27A0A0K0K1C4 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRBV27A0A0K0K1C4 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV27A0A0K0K1C4 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV27A0A0K0K1C4 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV27A0A0K0K1C4 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV27A0A0K0K1C4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRBV27A0A0K0K1C4 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.95■□□□□ 0.14
TRBV27A0A0K0K1C4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV27A0A0K0K1C4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV27A0A0K0K1C4 STK32C-205ENST00000456004 607 ntTSL 2 BASIC15.95■□□□□ 0.14
TRBV27A0A0K0K1C4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV27A0A0K0K1C4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV27A0A0K0K1C4 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRBV27A0A0K0K1C4 AC009831.1-201ENST00000580420 1582 ntBASIC15.95■□□□□ 0.14
TRBV27A0A0K0K1C4 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 AC133552.2-201ENST00000619106 1032 ntBASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRBV27A0A0K0K1C4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 AC087393.1-201ENST00000582896 145 ntBASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 AC018755.3-202ENST00000596210 929 ntBASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
TRBV27A0A0K0K1C4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TRBV27A0A0K0K1C4 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms