Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 PEX7-203ENST00000541292 945 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 AP002365.1-201ENST00000603448 772 ntBASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV22A0A0B4J277 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRAV22A0A0B4J277 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 MIR6089-201ENST00000616698 64 ntBASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC12.8□□□□□ -0.36
TRAV22A0A0B4J277 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 MCC-208ENST00000514701 2855 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 EML3-217ENST00000531557 2509 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV22A0A0B4J277 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC12.78□□□□□ -0.36
TRAV22A0A0B4J277 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms