Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV17A0A0B4J275 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV17A0A0B4J275 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV17A0A0B4J275 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
TRAV17A0A0B4J275 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAV17A0A0B4J275 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRAV17A0A0B4J275 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV17A0A0B4J275 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV17A0A0B4J275 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV17A0A0B4J275 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV17A0A0B4J275 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV17A0A0B4J275 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.58■□□□□ 0.89
TRAV17A0A0B4J275 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV17A0A0B4J275 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV17A0A0B4J275 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV17A0A0B4J275 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRAV17A0A0B4J275 AC022211.4-201ENST00000625094 2161 ntBASIC20.58■□□□□ 0.88
TRAV17A0A0B4J275 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV17A0A0B4J275 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.58■□□□□ 0.88
TRAV17A0A0B4J275 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV17A0A0B4J275 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV17A0A0B4J275 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV17A0A0B4J275 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV17A0A0B4J275 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV17A0A0B4J275 AC126544.1-201ENST00000580842 1059 ntBASIC20.57■□□□□ 0.88
TRAV17A0A0B4J275 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
TRAV17A0A0B4J275 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV17A0A0B4J275 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 AC087623.3-201ENST00000607047 1098 ntBASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.56■□□□□ 0.88
TRAV17A0A0B4J275 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV17A0A0B4J275 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV17A0A0B4J275 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV17A0A0B4J275 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.55■□□□□ 0.88
TRAV17A0A0B4J275 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
TRAV17A0A0B4J275 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV17A0A0B4J275 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV17A0A0B4J275 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV17A0A0B4J275 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV17A0A0B4J275 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.54■□□□□ 0.88
TRAV17A0A0B4J275 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRAV17A0A0B4J275 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.54■□□□□ 0.88
TRAV17A0A0B4J275 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV17A0A0B4J275 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV17A0A0B4J275 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.53■□□□□ 0.88
TRAV17A0A0B4J275 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV17A0A0B4J275 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.53■□□□□ 0.88
TRAV17A0A0B4J275 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV17A0A0B4J275 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV17A0A0B4J275 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRAV17A0A0B4J275 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV17A0A0B4J275 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.52■□□□□ 0.88
TRAV17A0A0B4J275 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TRAV17A0A0B4J275 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.52■□□□□ 0.88
TRAV17A0A0B4J275 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRAV17A0A0B4J275 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
TRAV17A0A0B4J275 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRAV17A0A0B4J275 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
TRAV17A0A0B4J275 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.51■□□□□ 0.87
TRAV17A0A0B4J275 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV17A0A0B4J275 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV17A0A0B4J275 AL162430.1-201ENST00000480705 870 ntBASIC20.51■□□□□ 0.87
TRAV17A0A0B4J275 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV17A0A0B4J275 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRAV17A0A0B4J275 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
TRAV17A0A0B4J275 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 SLC47A1P1-202ENST00000449666 945 ntBASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TRAV17A0A0B4J275 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV17A0A0B4J275 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
TRAV17A0A0B4J275 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV17A0A0B4J275 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV17A0A0B4J275 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV17A0A0B4J275 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
TRAV17A0A0B4J275 TSPY26P-201ENST00000476365 1326 ntBASIC20.48■□□□□ 0.87
TRAV17A0A0B4J275 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms