Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TRAV12-1A0A0B4J245 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 AC126177.7-201ENST00000547904 679 ntBASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
TRAV12-1A0A0B4J245 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.85■□□□□ 0.13
TRAV12-1A0A0B4J245 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TRAV12-1A0A0B4J245 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-1A0A0B4J245 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-1A0A0B4J245 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV12-1A0A0B4J245 MED25-210ENST00000612854 801 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV12-1A0A0B4J245 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-1A0A0B4J245 MED25-214ENST00000622402 642 ntTSL 5 BASIC15.84■□□□□ 0.13
TRAV12-1A0A0B4J245 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAV12-1A0A0B4J245 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV12-1A0A0B4J245 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV12-1A0A0B4J245 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.83■□□□□ 0.13
TRAV12-1A0A0B4J245 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV12-1A0A0B4J245 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAV12-1A0A0B4J245 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAV12-1A0A0B4J245 AC139530.1-201ENST00000575312 1977 ntBASIC15.83■□□□□ 0.12
TRAV12-1A0A0B4J245 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-1A0A0B4J245 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV12-1A0A0B4J245 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAV12-1A0A0B4J245 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAV12-1A0A0B4J245 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 FBXW4P1-201ENST00000426721 2239 ntBASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 AC021231.2-201ENST00000594613 730 ntBASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV12-1A0A0B4J245 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 CHST11-202ENST00000546689 756 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV12-1A0A0B4J245 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRAV12-1A0A0B4J245 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms