Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRAV8-1A0A0A6YYK1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 GPX1-201ENST00000419349 1106 ntBASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRAV8-1A0A0A6YYK1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRAV8-1A0A0A6YYK1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRAV8-1A0A0A6YYK1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 AL022069.1-201ENST00000568025 1636 ntBASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 ECEL1P1-201ENST00000373592 1742 ntBASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
TRAV8-1A0A0A6YYK1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-1A0A0A6YYK1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.08■□□□□ 0.33
TRAV8-1A0A0A6YYK1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TRAV8-1A0A0A6YYK1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AL592295.1-201ENST00000400984 884 ntBASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AC018755.3-202ENST00000596210 929 ntBASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TRAV8-1A0A0A6YYK1 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV8-1A0A0A6YYK1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms