Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRBV6-7A0A0A0MS04 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-7A0A0A0MS04 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-7A0A0A0MS04 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
TRBV6-7A0A0A0MS04 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-7A0A0A0MS04 AC129492.7-201ENST00000622992 756 ntBASIC18.92■□□□□ 0.62
TRBV6-7A0A0A0MS04 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRBV6-7A0A0A0MS04 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.91■□□□□ 0.62
TRBV6-7A0A0A0MS04 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRBV6-7A0A0A0MS04 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRBV6-7A0A0A0MS04 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 TERT-206ENST00000508104 2486 ntTSL 5 BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRBV6-7A0A0A0MS04 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRBV6-7A0A0A0MS04 KRT18P60-201ENST00000312876 1297 ntBASIC18.87■□□□□ 0.61
TRBV6-7A0A0A0MS04 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV6-7A0A0A0MS04 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.87■□□□□ 0.61
TRBV6-7A0A0A0MS04 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRBV6-7A0A0A0MS04 AC131274.2-201ENST00000580697 1507 ntBASIC18.87■□□□□ 0.61
TRBV6-7A0A0A0MS04 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 AC022616.5-201ENST00000518796 181 ntBASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 HSD17B1P1-201ENST00000590052 955 ntBASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 AC019171.1-201ENST00000601251 1056 ntBASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRBV6-7A0A0A0MS04 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 ALDH1A3-203ENST00000557963 1670 ntBASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRBV6-7A0A0A0MS04 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRBV6-7A0A0A0MS04 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms