Protein–RNA interactions for Protein: A0A075B6N1

TRBV19, T-cell receptor beta variable 19 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV19A0A075B6N1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRBV19A0A075B6N1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.22■□□□□ 0.35
TRBV19A0A075B6N1 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRBV19A0A075B6N1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 ECEL1P1-201ENST00000373592 1742 ntBASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.21■□□□□ 0.35
TRBV19A0A075B6N1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV19A0A075B6N1 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRBV19A0A075B6N1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 HYI-210ENST00000486909 905 ntTSL 5 BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 AC022616.5-201ENST00000518796 181 ntBASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 AC129492.7-201ENST00000622992 756 ntBASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRBV19A0A075B6N1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 AC127496.7-201ENST00000625110 1798 ntBASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV19A0A075B6N1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 AC019171.1-201ENST00000601251 1056 ntBASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 U85056.1-201ENST00000616429 682 ntBASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV19A0A075B6N1 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 RARRES2P2-201ENST00000394842 485 ntBASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV19A0A075B6N1 ESRRAP2-201ENST00000418437 1549 ntBASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV19A0A075B6N1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV19A0A075B6N1 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms