Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
RCL1Q9Y2P8 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 AK2P2-201ENST00000439142 405 ntBASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 LY6E-204ENST00000519546 971 ntTSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 AC004623.1-201ENST00000624592 2127 ntBASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
RCL1Q9Y2P8 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 AC011481.3-201ENST00000623895 5594 ntBASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 AC022400.8-201ENST00000623453 3599 ntBASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 NRP2-204ENST00000360409 6662 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
RCL1Q9Y2P8 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 KLF2P2-201ENST00000416807 1039 ntBASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 FO681548.1-201ENST00000455617 1132 ntBASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 AP001582.1-201ENST00000525856 295 ntBASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 AC007431.3-201ENST00000623221 587 ntBASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms