Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 CHMP5-202ENST00000419016 1957 ntTSL 2 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHANK2Q9UPX8 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 AC104961.1-201ENST00000427605 771 ntBASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 AC025594.1-201ENST00000469533 543 ntBASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 MKRN2-203ENST00000448482 1679 ntTSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 AL513497.1-201ENST00000624273 2083 ntBASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 RPSAP12-201ENST00000435879 888 ntBASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 RPL29P2-202ENST00000498671 657 ntBASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 EXTL3-AS1-203ENST00000520023 780 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 SRPK2P-201ENST00000523408 1100 ntBASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 AC090510.3-201ENST00000615831 821 ntBASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHANK2Q9UPX8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AC040160.2-201ENST00000623816 1675 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AC064850.1-201ENST00000413279 1398 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 PHBP10-201ENST00000416467 784 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AC133141.1-201ENST00000443015 339 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AC112250.1-201ENST00000504640 745 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 KRT8P34-201ENST00000577607 1044 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 MIR4746-201ENST00000579802 71 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 KRT18P8-201ENST00000581937 1246 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 KRT17P4-206ENST00000584151 719 ntTSL 4 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 LINC01836-201ENST00000586061 829 ntTSL 3 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AC139713.2-207ENST00000641556 1292 ntBASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHANK2Q9UPX8 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 FCRL6-202ENST00000339348 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SHANK2Q9UPX8 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms