Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 KCTD6-202ENST00000404589 1533 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 AC021305.1-201ENST00000520656 1514 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 PES1P2-201ENST00000449745 1735 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 GGTLC4P-201ENST00000402176 664 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 MIR1307-201ENST00000408840 149 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 PIN4P1-201ENST00000451079 396 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 STK24P1-201ENST00000455035 1291 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 ALG1L6P-201ENST00000515248 758 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 AL031673.1-201ENST00000611460 466 ntBASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SYNPO2Q9UMS6 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 AC015909.5-201ENST00000624336 2266 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 SSR4-202ENST00000370085 526 ntTSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 AL627389.1-201ENST00000413508 1182 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 LINC00634-202ENST00000505157 222 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 AC093826.1-201ENST00000508655 993 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 RN7SKP155-201ENST00000516031 288 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 MIR4326-201ENST00000582203 59 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 CR392039.2-201ENST00000623182 509 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 FUCA1P1-201ENST00000374476 1351 ntBASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SYNPO2Q9UMS6 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 AC099063.4-201ENST00000641099 1602 ntBASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 OR7E115P-201ENST00000382617 1024 ntBASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 ABCD1P4-201ENST00000399687 604 ntBASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 ACTBP14-201ENST00000411655 1089 ntBASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SYNPO2Q9UMS6 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms