Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 HIST2H2BA-201ENST00000412169 381 ntBASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 AP000911.2-201ENST00000534330 502 ntBASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 CMC2-204ENST00000562713 573 ntTSL 3 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 HERC2P11-201ENST00000562845 725 ntBASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 CMC2-209ENST00000565108 399 ntTSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 AC100756.2-201ENST00000569537 736 ntBASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 NUDT4P2-201ENST00000578341 546 ntBASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC17.24■□□□□ 0.35
DENND2AQ9ULE3 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 LINC00265-2P-201ENST00000413372 782 ntBASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 GOLGA2P8-201ENST00000505201 779 ntBASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 TMCO5B-205ENST00000530020 894 ntBASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 MIR3180-2-201ENST00000581748 88 ntBASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 MIR4649-201ENST00000582839 64 ntBASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 AC107464.3-201ENST00000609172 737 ntBASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DENND2AQ9ULE3 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DENND2AQ9ULE3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms