Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 Z82170.1-201ENST00000625081 3192 ntBASIC17.68■□□□□ 0.42
UPF2Q9HAU5 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 AC055876.3-201ENST00000431496 288 ntBASIC17.68■□□□□ 0.42
UPF2Q9HAU5 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 AC138649.4-201ENST00000612222 287 ntBASIC17.68■□□□□ 0.42
UPF2Q9HAU5 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UPF2Q9HAU5 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 SLC7A15P-201ENST00000424028 1363 ntBASIC17.67■□□□□ 0.42
UPF2Q9HAU5 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 PCDHB18P-202ENST00000526308 3197 ntBASIC17.67■□□□□ 0.42
UPF2Q9HAU5 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 AC068587.3-201ENST00000526613 355 ntBASIC17.67■□□□□ 0.42
UPF2Q9HAU5 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC17.67■□□□□ 0.42
UPF2Q9HAU5 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 AGAP12P-201ENST00000585227 2359 ntBASIC17.66■□□□□ 0.42
UPF2Q9HAU5 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC17.66■□□□□ 0.42
UPF2Q9HAU5 MYCLP2-201ENST00000449268 967 ntBASIC17.66■□□□□ 0.42
UPF2Q9HAU5 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms