Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 AC061965.1-201ENST00000560524 1465 ntBASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
RSPO3Q9BXY4 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 LINC01833-203ENST00000437916 2880 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC136604.1-202ENST00000425471 771 ntBASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC008620.2-201ENST00000510294 1569 ntBASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AP000346.4-201ENST00000614827 381 ntBASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AL445209.1-201ENST00000607269 3491 ntBASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 MIR497HG-202ENST00000572453 3838 ntBASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 AC104758.3-203ENST00000562938 2123 ntBASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
RSPO3Q9BXY4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 PCDHA3-202ENST00000532566 4594 ntBASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.08□□□□□ -0.31
RSPO3Q9BXY4 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 SARS-202ENST00000369923 1882 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AC004899.1-201ENST00000424687 1714 ntBASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.08□□□□□ -0.32
RSPO3Q9BXY4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms