Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 AC073862.5-201ENST00000624129 2027 ntBASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 PLEKHG3-203ENST00000471182 3106 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 INIP-203ENST00000374242 4233 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 WSCD2-201ENST00000332082 4710 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 C2-209ENST00000452323 1999 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 PERP-201ENST00000421351 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 ZFAND3-203ENST00000373391 3001 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 AL080243.2-201ENST00000418783 582 ntBASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 AC004832.2-201ENST00000426397 482 ntBASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 AP001005.1-201ENST00000571755 1248 ntBASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 NDRG4-236ENST00000566192 3265 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 KCNJ10-201ENST00000368089 5528 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 EPHA1-201ENST00000275815 3363 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 CETN4P-206ENST00000642099 2168 ntBASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 MKL1-210ENST00000614754 3917 ntTSL 5 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC9.34□□□□□ -0.91
SMIM11BQ8TCY0 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC9.34□□□□□ -0.92
SMIM11BQ8TCY0 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 SPATA13-203ENST00000382108 8463 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 NOA1-201ENST00000264230 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 AC079781.3-201ENST00000449110 356 ntBASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 AC022616.1-201ENST00000518688 554 ntBASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 GATD1-206ENST00000526325 756 ntTSL 5 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC9.33□□□□□ -0.92
SMIM11BQ8TCY0 AC145285.3-201ENST00000564603 959 ntBASIC9.33□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms