Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 BAX-205ENST00000391871 687 ntTSL 5 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 SNORA50C-201ENST00000408535 133 ntBASIC15.23■□□□□ 0.03
LMO3Q8TAP4 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 AC005740.1-201ENST00000515639 522 ntBASIC15.23■□□□□ 0.03
LMO3Q8TAP4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 RN7SL219P-201ENST00000582872 296 ntBASIC15.23■□□□□ 0.03
LMO3Q8TAP4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 SNORA50.1-201ENST00000628590 135 ntBASIC15.23■□□□□ 0.03
LMO3Q8TAP4 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 OR2I1P-210ENST00000642037 4691 ntBASIC15.23■□□□□ 0.03
LMO3Q8TAP4 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC15.23■□□□□ 0.03
LMO3Q8TAP4 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AC015909.3-201ENST00000572855 1794 ntBASIC15.22■□□□□ 0.03
LMO3Q8TAP4 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AC239868.1-201ENST00000369385 493 ntBASIC15.22■□□□□ 0.03
LMO3Q8TAP4 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AL596276.2-201ENST00000447525 331 ntBASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 BX284668.4-201ENST00000453917 508 ntBASIC15.22■□□□□ 0.03
LMO3Q8TAP4 DUX4L50-201ENST00000455245 715 ntBASIC15.22■□□□□ 0.03
LMO3Q8TAP4 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AC092658.1-201ENST00000505836 891 ntBASIC15.22■□□□□ 0.03
LMO3Q8TAP4 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 KRT8P1-201ENST00000557533 1207 ntBASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AC063926.3-201ENST00000624734 5658 ntBASIC15.22■□□□□ 0.03
LMO3Q8TAP4 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.22■□□□□ 0.03
LMO3Q8TAP4 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.21■□□□□ 0.03
LMO3Q8TAP4 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms