Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AL161932.2-201ENST00000435436 679 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 RN7SL618P-201ENST00000477850 296 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 RPL13AP23-201ENST00000480739 586 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AC026410.3-201ENST00000514280 936 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 TIMM17BP1-201ENST00000545713 516 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AC051619.7-201ENST00000568314 623 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AC104506.1-201ENST00000609247 429 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 BX539320.1-201ENST00000623759 877 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 HLA-A-201ENST00000376802 1334 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 BAIAP3-207ENST00000562208 3663 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AC108024.1-201ENST00000626286 1721 ntBASIC10.75□□□□□ -0.69
NUP35Q8NFH5 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 TPO-202ENST00000345913 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
NUP35Q8NFH5 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 POLD1-201ENST00000440232 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 PLA2G6-202ENST00000335539 3060 ntTSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 TMEM233-201ENST00000426426 3081 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AC005586.2-201ENST00000563946 837 ntBASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AC010336.2-201ENST00000564226 506 ntBASIC10.74□□□□□ -0.69
NUP35Q8NFH5 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AC009955.4-201ENST00000597192 544 ntBASIC10.74□□□□□ -0.69
NUP35Q8NFH5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 AL158212.4-201ENST00000624062 1286 ntBASIC10.74□□□□□ -0.69
NUP35Q8NFH5 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 FAM90A11P-201ENST00000518378 2218 ntBASIC10.74□□□□□ -0.69
NUP35Q8NFH5 FTO-214ENST00000636218 2227 ntTSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 NPTN-IT1-201ENST00000628401 2283 ntBASIC10.74□□□□□ -0.69
NUP35Q8NFH5 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 MICAL1-208ENST00000630715 3678 ntTSL 2 BASIC10.74□□□□□ -0.69
NUP35Q8NFH5 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC10.74□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms