Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TMEM53Q6P2H8 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AL035633.1-201ENST00000406139 838 ntBASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 BAATP1-201ENST00000412284 1225 ntBASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AL355864.2-201ENST00000447420 863 ntBASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AC022137.2-201ENST00000503482 481 ntBASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AC015936.2-201ENST00000593177 259 ntBASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TMEM53Q6P2H8 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 TBX3-202ENST00000349155 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AC092053.3-201ENST00000641308 4975 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 ACTBP8-201ENST00000403258 1108 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AL512384.1-201ENST00000406683 331 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 HLA-K-203ENST00000430151 1046 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 INE1-201ENST00000456273 945 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 RN7SL837P-201ENST00000463010 287 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 AC068587.3-201ENST00000526613 355 ntBASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
TMEM53Q6P2H8 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms