Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MST1L-204ENST00000545160 559 ntTSL 4 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC123912.6-201ENST00000612657 315 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 KRT8P25-201ENST00000473150 1456 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 MST1P2-201ENST00000457982 2291 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 PTCD2-207ENST00000503868 1653 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 HMGA1P2-201ENST00000430198 324 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC112250.1-201ENST00000504640 745 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 AC021321.1-201ENST00000607397 1113 ntBASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
VPS13DQ5THJ4 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 Z95624.1-201ENST00000413528 628 ntTSL 5 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC041040.1-201ENST00000425197 460 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC103563.2-201ENST00000442200 597 ntTSL 5 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC010202.1-201ENST00000551181 405 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AL450487.2-201ENST00000615934 407 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC093462.1-201ENST00000621167 1683 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC124319.4-201ENST00000622931 2161 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AL157996.1-201ENST00000624684 2299 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 CFL1P6-201ENST00000400899 494 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC078785.1-204ENST00000460707 764 ntTSL 3 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 ALOX12P1-201ENST00000579299 1229 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC134878.2-201ENST00000620700 1265 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC137723.2-201ENST00000623540 398 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AC152010.1-201ENST00000415779 2006 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 AL390755.1-201ENST00000623716 2027 ntBASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
VPS13DQ5THJ4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 MEG8-221ENST00000636391 2155 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 RNA5SP84-201ENST00000364740 107 ntBASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 CBR3-AS1-202ENST00000427491 741 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 AL583722.3-201ENST00000553433 503 ntTSL 4 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 AC104759.1-201ENST00000559109 939 ntBASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 CBR3-AS1-207ENST00000608641 777 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 AL121753.2-201ENST00000624581 1461 ntBASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 DDC-213ENST00000617822 1809 ntTSL 3 BASIC9.21□□□□□ -0.94
VPS13DQ5THJ4 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms