Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SHROOM1Q2M3G4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 RPL35P9-201ENST00000446059 350 ntBASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 EEF1GP8-201ENST00000506566 1154 ntBASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 RPS25-202ENST00000527673 835 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 AC138761.6-201ENST00000583997 1423 ntBASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SHROOM1Q2M3G4 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 TBC1D27-202ENST00000424239 1573 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 SHMT1P1-201ENST00000419974 1312 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 GOLGA8UP-201ENST00000527159 1755 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AC103592.1-201ENST00000394513 664 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AQP7P5-201ENST00000428759 1049 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AQP7P4-201ENST00000447083 1042 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AQP7P2-201ENST00000453967 1041 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AL157792.1-201ENST00000488281 530 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 AQP7P3-201ENST00000624547 1041 ntBASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 ST5-261ENST00000626808 1071 ntTSL 5 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
SHROOM1Q2M3G4 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
SHROOM1Q2M3G4 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SHROOM1Q2M3G4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms