Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 AL592076.1-201ENST00000424448 303 ntBASIC17.14■□□□□ 0.33
RFX7Q2KHR2 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 CTBP2P4-201ENST00000513884 920 ntBASIC17.14■□□□□ 0.33
RFX7Q2KHR2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.14■□□□□ 0.33
RFX7Q2KHR2 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 AC068760.1-201ENST00000493579 1953 ntBASIC17.13■□□□□ 0.33
RFX7Q2KHR2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 AC061965.1-201ENST00000560524 1465 ntBASIC17.13■□□□□ 0.33
RFX7Q2KHR2 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 BX679664.3-201ENST00000414070 555 ntBASIC17.13■□□□□ 0.33
RFX7Q2KHR2 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 AC113935.1-201ENST00000471722 555 ntBASIC17.13■□□□□ 0.33
RFX7Q2KHR2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 MT3-203ENST00000565838 421 ntTSL 3 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 MIR6858-201ENST00000620733 67 ntBASIC17.13■□□□□ 0.33
RFX7Q2KHR2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
RFX7Q2KHR2 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 AGAP10P-201ENST00000454844 2418 ntBASIC17.12■□□□□ 0.33
RFX7Q2KHR2 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 RN7SL455P-201ENST00000580629 282 ntBASIC17.12■□□□□ 0.33
RFX7Q2KHR2 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 AC073911.3-201ENST00000624401 631 ntBASIC17.12■□□□□ 0.33
RFX7Q2KHR2 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RFX7Q2KHR2 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms