Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3F3AP84243 AC117489.1-201ENST00000625169 3217 ntBASIC12.83□□□□□ -0.36
H3F3AP84243 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H3F3AP84243 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
H3F3AP84243 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
H3F3AP84243 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3F3AP84243 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3F3AP84243 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC12.83□□□□□ -0.36
H3F3AP84243 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3F3AP84243 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC12.83□□□□□ -0.36
H3F3AP84243 KRT8P21-201ENST00000430398 1491 ntBASIC12.83□□□□□ -0.36
H3F3AP84243 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3F3AP84243 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3F3AP84243 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.83□□□□□ -0.36
H3F3AP84243 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H3F3AP84243 AL731571.1-201ENST00000617058 5428 ntBASIC12.83□□□□□ -0.36
H3F3AP84243 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
H3F3AP84243 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.82□□□□□ -0.36
H3F3AP84243 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
H3F3AP84243 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.82□□□□□ -0.36
H3F3AP84243 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.82□□□□□ -0.36
H3F3AP84243 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC12.82□□□□□ -0.36
H3F3AP84243 MIR3615-201ENST00000581999 87 ntBASIC12.82□□□□□ -0.36
H3F3AP84243 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.82□□□□□ -0.36
H3F3AP84243 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.82□□□□□ -0.36
H3F3AP84243 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.82□□□□□ -0.36
H3F3AP84243 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
H3F3AP84243 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
H3F3AP84243 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.82□□□□□ -0.36
H3F3AP84243 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
H3F3AP84243 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.82□□□□□ -0.36
H3F3AP84243 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
H3F3AP84243 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.81□□□□□ -0.36
H3F3AP84243 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.81□□□□□ -0.36
H3F3AP84243 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
H3F3AP84243 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.81□□□□□ -0.36
H3F3AP84243 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 LINC01165-201ENST00000445190 1623 ntBASIC12.81□□□□□ -0.36
H3F3AP84243 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
H3F3AP84243 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 MST1P2-201ENST00000457982 2291 ntBASIC12.81□□□□□ -0.36
H3F3AP84243 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC12.81□□□□□ -0.36
H3F3AP84243 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 AC103592.1-201ENST00000394513 664 ntBASIC12.81□□□□□ -0.36
H3F3AP84243 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.81□□□□□ -0.36
H3F3AP84243 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.81□□□□□ -0.36
H3F3AP84243 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
H3F3AP84243 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.81□□□□□ -0.36
H3F3AP84243 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.81□□□□□ -0.36
H3F3AP84243 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms