Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
SKP1P63208 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SKP1P63208 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SKP1P63208 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
SKP1P63208 CACNA2D2-205ENST00000429770 5304 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SKP1P63208 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC13.65□□□□□ -0.22
SKP1P63208 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 AC239868.1-201ENST00000369385 493 ntBASIC13.65□□□□□ -0.22
SKP1P63208 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SKP1P63208 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 Z97180.1-201ENST00000445173 988 ntBASIC13.65□□□□□ -0.22
SKP1P63208 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.65□□□□□ -0.22
SKP1P63208 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.65□□□□□ -0.22
SKP1P63208 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 AC005912.2-201ENST00000619492 2400 ntBASIC13.65□□□□□ -0.22
SKP1P63208 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SKP1P63208 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SKP1P63208 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SKP1P63208 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
SKP1P63208 AL590824.1-201ENST00000403828 1349 ntBASIC13.64□□□□□ -0.23
SKP1P63208 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 TUBBP5-203ENST00000508529 1334 ntBASIC13.64□□□□□ -0.23
SKP1P63208 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC13.64□□□□□ -0.23
SKP1P63208 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC13.64□□□□□ -0.23
SKP1P63208 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SKP1P63208 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SKP1P63208 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC13.64□□□□□ -0.23
SKP1P63208 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.64□□□□□ -0.23
SKP1P63208 RN7SL530P-201ENST00000485097 298 ntBASIC13.64□□□□□ -0.23
SKP1P63208 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC13.64□□□□□ -0.23
SKP1P63208 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.64□□□□□ -0.23
SKP1P63208 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.64□□□□□ -0.23
SKP1P63208 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms