Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC15.49■□□□□ 0.07
SNRPFP62306 ELK2AP-201ENST00000392510 1007 ntBASIC15.49■□□□□ 0.07
SNRPFP62306 BANF1P3-201ENST00000412556 261 ntBASIC15.49■□□□□ 0.07
SNRPFP62306 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.49■□□□□ 0.07
SNRPFP62306 OR8T1P-201ENST00000421347 918 ntBASIC15.49■□□□□ 0.07
SNRPFP62306 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC15.49■□□□□ 0.07
SNRPFP62306 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 RN7SL258P-201ENST00000478664 300 ntBASIC15.49■□□□□ 0.07
SNRPFP62306 ELP5-212ENST00000574255 671 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 RN7SL455P-201ENST00000580629 282 ntBASIC15.49■□□□□ 0.07
SNRPFP62306 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.49■□□□□ 0.07
SNRPFP62306 MIR6769A-201ENST00000617340 73 ntBASIC15.49■□□□□ 0.07
SNRPFP62306 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 CROT-203ENST00000419147 2959 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
SNRPFP62306 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC15.49■□□□□ 0.07
SNRPFP62306 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
SNRPFP62306 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRPFP62306 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
SNRPFP62306 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRPFP62306 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 AC068760.1-201ENST00000493579 1953 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 SPTLC1P5-201ENST00000450718 252 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 REEP1-202ENST00000453231 940 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRPFP62306 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.48■□□□□ 0.07
SNRPFP62306 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRPFP62306 AC005740.1-201ENST00000515639 522 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 NDUFB10P1-201ENST00000567319 521 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 PHBP15-201ENST00000574228 665 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 AC103810.3-201ENST00000583567 96 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 AC244093.1-201ENST00000610837 814 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 LINC01783-202ENST00000614408 828 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 BX284668.2-205ENST00000619677 828 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SNRPFP62306 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC15.48■□□□□ 0.07
SNRPFP62306 MARK2P9-201ENST00000430958 1727 ntBASIC15.48■□□□□ 0.07
SNRPFP62306 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRPFP62306 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
SNRPFP62306 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
SNRPFP62306 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
SNRPFP62306 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.48■□□□□ 0.07
SNRPFP62306 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.47■□□□□ 0.07
SNRPFP62306 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.47■□□□□ 0.07
SNRPFP62306 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.47■□□□□ 0.07
SNRPFP62306 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 AC015909.3-201ENST00000572855 1794 ntBASIC15.47■□□□□ 0.07
SNRPFP62306 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
SNRPFP62306 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
SNRPFP62306 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
SNRPFP62306 KRT17P5-201ENST00000332088 839 ntBASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms