Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 AC093004.1-201ENST00000508850 424 ntBASIC13.11□□□□□ -0.31
CXCR4P61073 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 AC055876.2-201ENST00000531834 546 ntBASIC13.11□□□□□ -0.31
CXCR4P61073 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.11□□□□□ -0.31
CXCR4P61073 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.11□□□□□ -0.31
CXCR4P61073 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 AC138696.2-201ENST00000607376 223 ntBASIC13.11□□□□□ -0.31
CXCR4P61073 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 AC093512.1-201ENST00000617969 520 ntBASIC13.11□□□□□ -0.31
CXCR4P61073 AC008761.3-201ENST00000624803 892 ntBASIC13.11□□□□□ -0.31
CXCR4P61073 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 AP003969.2-201ENST00000623739 2275 ntBASIC13.11□□□□□ -0.31
CXCR4P61073 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 PCDHA6-201ENST00000378126 3267 ntBASIC13.11□□□□□ -0.31
CXCR4P61073 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CXCR4P61073 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.11□□□□□ -0.31
CXCR4P61073 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.11□□□□□ -0.31
CXCR4P61073 C2-209ENST00000452323 1999 ntTSL 2 BASIC13.11□□□□□ -0.31
CXCR4P61073 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CXCR4P61073 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.1□□□□□ -0.31
CXCR4P61073 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC13.1□□□□□ -0.31
CXCR4P61073 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.1□□□□□ -0.31
CXCR4P61073 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CXCR4P61073 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.1□□□□□ -0.31
CXCR4P61073 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 ACTBP8-201ENST00000403258 1108 ntBASIC13.1□□□□□ -0.31
CXCR4P61073 LBH-203ENST00000404397 543 ntTSL 4 BASIC13.1□□□□□ -0.31
CXCR4P61073 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.1□□□□□ -0.31
CXCR4P61073 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 PON3-203ENST00000427422 894 ntTSL 3 BASIC13.1□□□□□ -0.31
CXCR4P61073 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.1□□□□□ -0.31
CXCR4P61073 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.1□□□□□ -0.31
CXCR4P61073 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.1□□□□□ -0.31
CXCR4P61073 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 AC004466.1-201ENST00000599515 1080 ntBASIC13.1□□□□□ -0.31
CXCR4P61073 AC099568.2-201ENST00000609194 695 ntBASIC13.1□□□□□ -0.31
CXCR4P61073 AP005019.2-201ENST00000615104 511 ntBASIC13.1□□□□□ -0.31
CXCR4P61073 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 LINC02486-201ENST00000604157 3000 ntBASIC13.1□□□□□ -0.31
CXCR4P61073 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CXCR4P61073 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.1□□□□□ -0.31
CXCR4P61073 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CXCR4P61073 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.1□□□□□ -0.31
CXCR4P61073 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CXCR4P61073 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 475.9 ms