Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
APOC4P55056 MARK2P16-201ENST00000605714 1723 ntBASIC10.53□□□□□ -0.72
APOC4P55056 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
APOC4P55056 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
APOC4P55056 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC10.53□□□□□ -0.72
APOC4P55056 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
APOC4P55056 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
APOC4P55056 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.72
APOC4P55056 AC113367.3-201ENST00000508316 1912 ntBASIC10.52□□□□□ -0.72
APOC4P55056 AC144831.1-201ENST00000573312 2656 ntBASIC10.52□□□□□ -0.72
APOC4P55056 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC10.52□□□□□ -0.72
APOC4P55056 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
APOC4P55056 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC10.52□□□□□ -0.72
APOC4P55056 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
APOC4P55056 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
APOC4P55056 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 AL627231.1-201ENST00000394467 1125 ntBASIC10.52□□□□□ -0.73
APOC4P55056 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC10.52□□□□□ -0.73
APOC4P55056 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC10.52□□□□□ -0.73
APOC4P55056 TMEM198B-204ENST00000484016 896 ntBASIC10.52□□□□□ -0.73
APOC4P55056 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC10.52□□□□□ -0.73
APOC4P55056 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 HPN-206ENST00000597419 1212 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 AC103810.10-201ENST00000606504 343 ntBASIC10.52□□□□□ -0.73
APOC4P55056 AC104506.1-201ENST00000609247 429 ntBASIC10.52□□□□□ -0.73
APOC4P55056 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 AC092123.2-201ENST00000611189 5421 ntBASIC10.52□□□□□ -0.73
APOC4P55056 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 RDX-218ENST00000544551 4117 ntTSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
APOC4P55056 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
APOC4P55056 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.52□□□□□ -0.73
APOC4P55056 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC10.51□□□□□ -0.73
APOC4P55056 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
APOC4P55056 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC10.51□□□□□ -0.73
APOC4P55056 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
APOC4P55056 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms