Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 FTH1P22-201ENST00000456305 520 ntBASIC13.94□□□□□ -0.18
PDX1P52945 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 MRPL22P1-201ENST00000505398 616 ntBASIC13.94□□□□□ -0.18
PDX1P52945 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 IGHV3-37-201ENST00000518544 340 ntBASIC13.94□□□□□ -0.18
PDX1P52945 TMCO5B-205ENST00000530020 894 ntBASIC13.94□□□□□ -0.18
PDX1P52945 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 AC007326.1-201ENST00000604539 458 ntBASIC13.94□□□□□ -0.18
PDX1P52945 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
PDX1P52945 AC009560.1-201ENST00000620208 434 ntBASIC13.94□□□□□ -0.18
PDX1P52945 AC009084.3-201ENST00000623356 437 ntBASIC13.94□□□□□ -0.18
PDX1P52945 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 AC009093.10-201ENST00000641956 1442 ntBASIC13.94□□□□□ -0.18
PDX1P52945 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 AL354702.1-201ENST00000442006 1960 ntBASIC13.94□□□□□ -0.18
PDX1P52945 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 AL136172.1-201ENST00000598590 1394 ntBASIC13.94□□□□□ -0.18
PDX1P52945 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC13.94□□□□□ -0.18
PDX1P52945 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.94□□□□□ -0.18
PDX1P52945 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
PDX1P52945 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PDX1P52945 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.93□□□□□ -0.18
PDX1P52945 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.93□□□□□ -0.18
PDX1P52945 AC092135.3-201ENST00000624151 1846 ntBASIC13.93□□□□□ -0.18
PDX1P52945 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.93□□□□□ -0.18
PDX1P52945 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
PDX1P52945 AC067750.1-201ENST00000608826 6545 ntBASIC13.93□□□□□ -0.18
PDX1P52945 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.93□□□□□ -0.18
PDX1P52945 KRT18P66-201ENST00000452970 1269 ntBASIC13.93□□□□□ -0.18
PDX1P52945 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.93□□□□□ -0.18
PDX1P52945 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.93□□□□□ -0.18
PDX1P52945 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.93□□□□□ -0.18
PDX1P52945 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 AC005618.3-201ENST00000624928 458 ntBASIC13.93□□□□□ -0.18
PDX1P52945 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
PDX1P52945 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
PDX1P52945 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms