Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK7P50613 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CDK7P50613 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.75■□□□□ 0.11
CDK7P50613 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.75■□□□□ 0.11
CDK7P50613 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK7P50613 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK7P50613 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK7P50613 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK7P50613 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CDK7P50613 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 GRPEL2P1-201ENST00000453145 339 ntBASIC15.74■□□□□ 0.11
CDK7P50613 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 KLF17P1-201ENST00000547105 1126 ntBASIC15.74■□□□□ 0.11
CDK7P50613 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC15.74■□□□□ 0.11
CDK7P50613 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC15.74■□□□□ 0.11
CDK7P50613 TRMT112P3-201ENST00000580149 358 ntBASIC15.74■□□□□ 0.11
CDK7P50613 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 DGAT2L7P-201ENST00000602462 744 ntBASIC15.74■□□□□ 0.11
CDK7P50613 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC15.74■□□□□ 0.11
CDK7P50613 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 AL137784.3-201ENST00000623858 2288 ntBASIC15.74■□□□□ 0.11
CDK7P50613 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK7P50613 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK7P50613 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDK7P50613 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDK7P50613 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
CDK7P50613 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
CDK7P50613 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDK7P50613 AGAP7P-201ENST00000582299 2062 ntBASIC15.73■□□□□ 0.11
CDK7P50613 AGAP14-201ENST00000624701 2060 ntBASIC15.73■□□□□ 0.11
CDK7P50613 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC15.73■□□□□ 0.11
CDK7P50613 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC15.73■□□□□ 0.11
CDK7P50613 AL161932.2-201ENST00000435436 679 ntBASIC15.73■□□□□ 0.11
CDK7P50613 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 PFN2-212ENST00000490975 858 ntTSL 4 BASIC15.73■□□□□ 0.11
CDK7P50613 AC083801.1-201ENST00000491689 358 ntBASIC15.73■□□□□ 0.11
CDK7P50613 RN7SL375P-201ENST00000492442 298 ntBASIC15.73■□□□□ 0.11
CDK7P50613 AC008026.2-201ENST00000495438 348 ntBASIC15.73■□□□□ 0.11
CDK7P50613 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC15.73■□□□□ 0.11
CDK7P50613 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC15.73■□□□□ 0.11
CDK7P50613 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC15.73■□□□□ 0.11
CDK7P50613 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC15.73■□□□□ 0.11
CDK7P50613 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK7P50613 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK7P50613 AP005264.5-201ENST00000590066 467 ntBASIC15.73■□□□□ 0.11
CDK7P50613 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDK7P50613 AC019109.1-201ENST00000401725 1874 ntBASIC15.73■□□□□ 0.11
CDK7P50613 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms